2024-09-18 15:22:22 INFO run /tmp/tmpyv4l9cyy# git -c advice.detachedHead=false clone --quiet https://github.com/ARPA-SIMC/cdo-rpm --branch master 2024-09-18 15:22:22 INFO moncic.cli.build Source type: rpm-arpa-git 2024-09-18 15:22:22 INFO system.fedora40 Starting system fedora40 as mc-bulayewe using image /moncic-ci/fedora40 2024-09-18 15:22:22 INFO system.fedora40 Running systemd-run --property=KillMode=mixed --property=Type=notify --property=RestartForceExitStatus=133 --property=SuccessExitStatus=133 --property=Slice=machine.slice --property=Delegate=yes --property=TasksMax=16384 --property=WatchdogSec=3min systemd-nspawn --quiet --directory=/moncic-ci/fedora40 --machine=mc-bulayewe --boot --notify-ready=yes --resolv-conf=replace-host --bind-ro=/tmp/tmpyv4l9cyy/cdo-rpm:/srv/moncic-ci/source/cdo-rpm --ephemeral --suppress-sync=yes systemd.hostname=mc-bulayewe 2024-09-18 15:22:29 INFO system.fedora40 Running check or create user 'root' and group 'root' 2024-09-18 15:22:30 INFO system.fedora40 Running Run setup scripts from binds 2024-09-18 15:22:30 INFO moncic.build.builder Build strategy: ARPA 2024-09-18 15:22:30 INFO system.fedora40 Running Run the build 2024-09-18 15:22:30 INFO system.fedora40.run /srv/moncic-ci/source/cdo-rpm# /usr/bin/dnf updateinfo -q -y 2024-09-18 15:23:00 INFO system.fedora40.run /srv/moncic-ci/source/cdo-rpm# /usr/bin/dnf upgrade -q -y 2024-09-18 15:23:03 INFO system.fedora40.run /srv/moncic-ci/source/cdo-rpm# dnf builddep -y cdo.spec 2024-09-18 15:23:04 INFO system.fedora40 stdout: Last metadata expiration check: 0:00:13 ago on Wed Sep 18 15:22:51 2024. 2024-09-18 15:23:04 INFO system.fedora40 stdout: Package python3-3.12.6-1.fc40.x86_64 is already installed. 2024-09-18 15:23:04 INFO system.fedora40 stdout: Dependencies resolved. 2024-09-18 15:23:04 INFO system.fedora40 stdout: ================================================================================ 2024-09-18 15:23:04 INFO system.fedora40 stdout: Package Arch Version Repository Size 2024-09-18 15:23:04 INFO system.fedora40 stdout: ================================================================================ 2024-09-18 15:23:04 INFO system.fedora40 stdout: Installing: 2024-09-18 15:23:04 INFO system.fedora40 stdout: gcc-c++ x86_64 14.2.1-1.fc40 updates 14 M 2024-09-18 15:23:04 INFO system.fedora40 stdout: gcc-gfortran x86_64 14.2.1-1.fc40 updates 13 M 2024-09-18 15:23:04 INFO system.fedora40 stdout: hdf5-devel x86_64 1.12.1-15.fc40 fedora 1.3 M 2024-09-18 15:23:04 INFO system.fedora40 stdout: libtool x86_64 2.4.7-10.fc40 fedora 601 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: netcdf-cxx-devel x86_64 4.2-34.fc40 fedora 368 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: Installing dependencies: 2024-09-18 15:23:04 INFO system.fedora40 stdout: annobin-docs noarch 12.60-1.fc40 updates 90 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: annobin-plugin-gcc x86_64 12.60-1.fc40 updates 966 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: autoconf noarch 2.71-10.fc40 fedora 733 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: automake noarch 1.16.5-16.fc40 fedora 697 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: blosc x86_64 1.21.6-1.fc40 updates 59 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: cmake-filesystem x86_64 3.28.2-1.fc40 fedora 18 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: cpp x86_64 14.2.1-1.fc40 updates 12 M 2024-09-18 15:23:04 INFO system.fedora40 stdout: gc x86_64 8.2.2-6.fc40 fedora 110 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: gcc x86_64 14.2.1-1.fc40 updates 37 M 2024-09-18 15:23:04 INFO system.fedora40 stdout: gcc-plugin-annobin x86_64 14.2.1-1.fc40 updates 54 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: glibc-devel x86_64 2.39-22.fc40 updates 116 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: glibc-headers-x86 noarch 2.39-22.fc40 updates 610 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: guile30 x86_64 3.0.7-12.fc40 fedora 8.1 M 2024-09-18 15:23:04 INFO system.fedora40 stdout: hdf-libs x86_64 4.2.16.2-1.fc40 fedora 288 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: hdf5 x86_64 1.12.1-15.fc40 fedora 2.2 M 2024-09-18 15:23:04 INFO system.fedora40 stdout: kernel-headers x86_64 6.10.3-200.fc40 updates 1.6 M 2024-09-18 15:23:04 INFO system.fedora40 stdout: libaec x86_64 1.1.2-1.fc40 fedora 37 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: libaec-devel x86_64 1.1.2-1.fc40 fedora 12 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: libcurl-devel x86_64 8.6.0-10.fc40 updates 851 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: libgfortran x86_64 14.2.1-1.fc40 updates 938 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: libjpeg-turbo x86_64 3.0.2-1.fc40 fedora 227 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: libmpc x86_64 1.3.1-5.fc40 fedora 71 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: libquadmath x86_64 14.2.1-1.fc40 updates 201 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: libquadmath-devel x86_64 14.2.1-1.fc40 updates 43 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: libstdc++-devel x86_64 14.2.1-1.fc40 updates 2.7 M 2024-09-18 15:23:04 INFO system.fedora40 stdout: libxcrypt-devel x86_64 4.4.36-5.fc40 fedora 29 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: m4 x86_64 1.4.19-9.fc40 fedora 305 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: make x86_64 1:4.4.1-6.fc40 fedora 588 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: netcdf x86_64 4.9.2-5.fc40 fedora 833 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: netcdf-cxx x86_64 4.2-34.fc40 fedora 44 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: netcdf-devel x86_64 4.9.2-5.fc40 fedora 100 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: perl-File-Compare noarch 1.100.700-506.fc40 fedora 14 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: perl-File-Copy noarch 2.41-506.fc40 fedora 21 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: perl-Thread-Queue noarch 3.14-503.fc40 fedora 21 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: perl-threads x86_64 1:2.36-503.fc40 fedora 58 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: perl-threads-shared x86_64 1.68-502.fc40 fedora 45 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: snappy x86_64 1.1.10-4.fc40 fedora 37 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: zlib-ng-compat-devel x86_64 2.1.7-2.fc40 updates 38 k 2024-09-18 15:23:04 INFO system.fedora40 stdout: 2024-09-18 15:23:04 INFO system.fedora40 stdout: Transaction Summary 2024-09-18 15:23:04 INFO system.fedora40 stdout: ================================================================================ 2024-09-18 15:23:04 INFO system.fedora40 stdout: Install 43 Packages 2024-09-18 15:23:04 INFO system.fedora40 stdout: 2024-09-18 15:23:04 INFO system.fedora40 stdout: Total download size: 102 M 2024-09-18 15:23:04 INFO system.fedora40 stdout: Installed size: 324 M 2024-09-18 15:23:04 INFO system.fedora40 stdout: Downloading Packages: 2024-09-18 15:23:05 INFO system.fedora40 stdout: (1/43): cmake-filesystem-3.28.2-1.fc40.x86_64.r 126 kB/s | 18 kB 00:00 2024-09-18 15:23:06 INFO system.fedora40 stdout: (2/43): gc-8.2.2-6.fc40.x86_64.rpm 383 kB/s | 110 kB 00:00 2024-09-18 15:23:07 INFO system.fedora40 stdout: (3/43): autoconf-2.71-10.fc40.noarch.rpm 433 kB/s | 733 kB 00:01 2024-09-18 15:23:08 INFO system.fedora40 stdout: (4/43): hdf-libs-4.2.16.2-1.fc40.x86_64.rpm 549 kB/s | 288 kB 00:00 2024-09-18 15:23:08 INFO system.fedora40 stdout: (5/43): automake-1.16.5-16.fc40.noarch.rpm 255 kB/s | 697 kB 00:02 2024-09-18 15:23:10 INFO system.fedora40 stdout: (6/43): hdf5-1.12.1-15.fc40.x86_64.rpm 1.0 MB/s | 2.2 MB 00:02 2024-09-18 15:23:10 INFO system.fedora40 stdout: (7/43): libaec-1.1.2-1.fc40.x86_64.rpm 530 kB/s | 37 kB 00:00 2024-09-18 15:23:10 INFO system.fedora40 stdout: (8/43): hdf5-devel-1.12.1-15.fc40.x86_64.rpm 795 kB/s | 1.3 MB 00:01 2024-09-18 15:23:10 INFO system.fedora40 stdout: (9/43): libaec-devel-1.1.2-1.fc40.x86_64.rpm 187 kB/s | 12 kB 00:00 2024-09-18 15:23:10 INFO system.fedora40 stdout: (10/43): libmpc-1.3.1-5.fc40.x86_64.rpm 572 kB/s | 71 kB 00:00 2024-09-18 15:23:10 INFO system.fedora40 stdout: (11/43): libjpeg-turbo-3.0.2-1.fc40.x86_64.rpm 830 kB/s | 227 kB 00:00 2024-09-18 15:23:10 INFO system.fedora40 stdout: (12/43): libxcrypt-devel-4.4.36-5.fc40.x86_64.r 349 kB/s | 29 kB 00:00 2024-09-18 15:23:10 INFO system.fedora40 stdout: (13/43): libtool-2.4.7-10.fc40.x86_64.rpm 1.0 MB/s | 601 kB 00:00 2024-09-18 15:23:11 INFO system.fedora40 stdout: (14/43): m4-1.4.19-9.fc40.x86_64.rpm 779 kB/s | 305 kB 00:00 2024-09-18 15:23:11 INFO system.fedora40 stdout: (15/43): make-4.4.1-6.fc40.x86_64.rpm 1.1 MB/s | 588 kB 00:00 2024-09-18 15:23:12 INFO system.fedora40 stdout: (16/43): netcdf-4.9.2-5.fc40.x86_64.rpm 751 kB/s | 833 kB 00:01 2024-09-18 15:23:12 INFO system.fedora40 stdout: (17/43): netcdf-cxx-4.2-34.fc40.x86_64.rpm 62 kB/s | 44 kB 00:00 2024-09-18 15:23:12 INFO system.fedora40 stdout: (18/43): netcdf-devel-4.9.2-5.fc40.x86_64.rpm 165 kB/s | 100 kB 00:00 2024-09-18 15:23:12 INFO system.fedora40 stdout: (19/43): netcdf-cxx-devel-4.2-34.fc40.x86_64.rp 450 kB/s | 368 kB 00:00 2024-09-18 15:23:13 INFO system.fedora40 stdout: (20/43): perl-File-Compare-1.100.700-506.fc40.n 72 kB/s | 14 kB 00:00 2024-09-18 15:23:13 INFO system.fedora40 stdout: (21/43): perl-File-Copy-2.41-506.fc40.noarch.rp 185 kB/s | 21 kB 00:00 2024-09-18 15:23:13 INFO system.fedora40 stdout: (22/43): perl-Thread-Queue-3.14-503.fc40.noarch 221 kB/s | 21 kB 00:00 2024-09-18 15:23:13 INFO system.fedora40 stdout: (23/43): perl-threads-2.36-503.fc40.x86_64.rpm 390 kB/s | 58 kB 00:00 2024-09-18 15:23:13 INFO system.fedora40 stdout: (24/43): perl-threads-shared-1.68-502.fc40.x86_ 251 kB/s | 45 kB 00:00 2024-09-18 15:23:13 INFO system.fedora40 stdout: (25/43): snappy-1.1.10-4.fc40.x86_64.rpm 182 kB/s | 37 kB 00:00 2024-09-18 15:23:13 INFO system.fedora40 stdout: (26/43): annobin-docs-12.60-1.fc40.noarch.rpm 273 kB/s | 90 kB 00:00 2024-09-18 15:23:14 INFO system.fedora40 stdout: (27/43): blosc-1.21.6-1.fc40.x86_64.rpm 99 kB/s | 59 kB 00:00 2024-09-18 15:23:14 INFO system.fedora40 stdout: (28/43): annobin-plugin-gcc-12.60-1.fc40.x86_64 983 kB/s | 966 kB 00:00 2024-09-18 15:23:15 INFO system.fedora40 stdout: (29/43): cpp-14.2.1-1.fc40.x86_64.rpm 11 MB/s | 12 MB 00:01 2024-09-18 15:23:15 INFO system.fedora40 stdout: (30/43): gcc-c++-14.2.1-1.fc40.x86_64.rpm 28 MB/s | 14 MB 00:00 2024-09-18 15:23:16 INFO system.fedora40 stdout: (31/43): guile30-3.0.7-12.fc40.x86_64.rpm 837 kB/s | 8.1 MB 00:09 2024-09-18 15:23:16 INFO system.fedora40 stdout: (32/43): gcc-gfortran-14.2.1-1.fc40.x86_64.rpm 22 MB/s | 13 MB 00:00 2024-09-18 15:23:16 INFO system.fedora40 stdout: (33/43): gcc-plugin-annobin-14.2.1-1.fc40.x86_6 192 kB/s | 54 kB 00:00 2024-09-18 15:23:16 INFO system.fedora40 stdout: (34/43): gcc-14.2.1-1.fc40.x86_64.rpm 15 MB/s | 37 MB 00:02 2024-09-18 15:23:16 INFO system.fedora40 stdout: (35/43): glibc-devel-2.39-22.fc40.x86_64.rpm 274 kB/s | 116 kB 00:00 2024-09-18 15:23:17 INFO system.fedora40 stdout: (36/43): libcurl-devel-8.6.0-10.fc40.x86_64.rpm 7.8 MB/s | 851 kB 00:00 2024-09-18 15:23:17 INFO system.fedora40 stdout: (37/43): glibc-headers-x86-2.39-22.fc40.noarch. 1.1 MB/s | 610 kB 00:00 2024-09-18 15:23:17 INFO system.fedora40 stdout: (38/43): kernel-headers-6.10.3-200.fc40.x86_64. 8.6 MB/s | 1.6 MB 00:00 2024-09-18 15:23:17 INFO system.fedora40 stdout: (39/43): libquadmath-14.2.1-1.fc40.x86_64.rpm 3.1 MB/s | 201 kB 00:00 2024-09-18 15:23:17 INFO system.fedora40 stdout: (40/43): libquadmath-devel-14.2.1-1.fc40.x86_64 2.2 MB/s | 43 kB 00:00 2024-09-18 15:23:17 INFO system.fedora40 stdout: (41/43): libgfortran-14.2.1-1.fc40.x86_64.rpm 7.9 MB/s | 938 kB 00:00 2024-09-18 15:23:17 INFO system.fedora40 stdout: (42/43): zlib-ng-compat-devel-2.1.7-2.fc40.x86_ 1.3 MB/s | 38 kB 00:00 2024-09-18 15:23:17 INFO system.fedora40 stdout: (43/43): libstdc++-devel-14.2.1-1.fc40.x86_64.r 17 MB/s | 2.7 MB 00:00 2024-09-18 15:23:17 INFO system.fedora40 stdout: -------------------------------------------------------------------------------- 2024-09-18 15:23:17 INFO system.fedora40 stdout: Total 8.1 MB/s | 102 MB 00:12 2024-09-18 15:23:19 INFO system.fedora40 stdout: Running transaction check 2024-09-18 15:23:19 INFO system.fedora40 stdout: Transaction check succeeded. 2024-09-18 15:23:19 INFO system.fedora40 stdout: Running transaction test 2024-09-18 15:23:21 INFO system.fedora40 stdout: Transaction test succeeded. 2024-09-18 15:23:21 INFO system.fedora40 stdout: Running transaction 2024-09-18 15:23:23 INFO system.fedora40 stdout: Preparing : 1/1 2024-09-18 15:23:23 INFO system.fedora40 stdout: Installing : libmpc-1.3.1-5.fc40.x86_64 1/43 2024-09-18 15:23:23 INFO system.fedora40 stdout: Installing : libaec-1.1.2-1.fc40.x86_64 2/43 2024-09-18 15:23:23 INFO system.fedora40 stdout: Installing : libquadmath-14.2.1-1.fc40.x86_64 3/43 2024-09-18 15:23:24 INFO system.fedora40 stdout: Installing : libgfortran-14.2.1-1.fc40.x86_64 4/43 2024-09-18 15:23:24 INFO system.fedora40 stdout: Installing : hdf5-1.12.1-15.fc40.x86_64 5/43 2024-09-18 15:23:24 INFO system.fedora40 stdout: Installing : perl-threads-1:2.36-503.fc40.x86_64 6/43 2024-09-18 15:23:24 INFO system.fedora40 stdout: Installing : perl-threads-shared-1.68-502.fc40.x86_64 7/43 2024-09-18 15:23:24 INFO system.fedora40 stdout: Installing : perl-Thread-Queue-3.14-503.fc40.noarch 8/43 2024-09-18 15:23:24 INFO system.fedora40 stdout: Installing : libaec-devel-1.1.2-1.fc40.x86_64 9/43 2024-09-18 15:23:24 INFO system.fedora40 stdout: Installing : cpp-14.2.1-1.fc40.x86_64 10/43 2024-09-18 15:23:25 INFO system.fedora40 stdout: Installing : libstdc++-devel-14.2.1-1.fc40.x86_64 11/43 2024-09-18 15:23:25 INFO system.fedora40 stdout: Installing : libcurl-devel-8.6.0-10.fc40.x86_64 12/43 2024-09-18 15:23:25 INFO system.fedora40 stdout: Installing : kernel-headers-6.10.3-200.fc40.x86_64 13/43 2024-09-18 15:23:25 INFO system.fedora40 stdout: Installing : glibc-headers-x86-2.39-22.fc40.noarch 14/43 2024-09-18 15:23:25 INFO system.fedora40 stdout: Installing : glibc-devel-2.39-22.fc40.x86_64 15/43 2024-09-18 15:23:25 INFO system.fedora40 stdout: Installing : libxcrypt-devel-4.4.36-5.fc40.x86_64 16/43 2024-09-18 15:23:25 INFO system.fedora40 stdout: Installing : annobin-docs-12.60-1.fc40.noarch 17/43 2024-09-18 15:23:25 INFO system.fedora40 stdout: Installing : snappy-1.1.10-4.fc40.x86_64 18/43 2024-09-18 15:23:25 INFO system.fedora40 stdout: Installing : blosc-1.21.6-1.fc40.x86_64 19/43 2024-09-18 15:23:25 INFO system.fedora40 stdout: Installing : perl-File-Copy-2.41-506.fc40.noarch 20/43 2024-09-18 15:23:25 INFO system.fedora40 stdout: Installing : perl-File-Compare-1.100.700-506.fc40.noarch 21/43 2024-09-18 15:23:25 INFO system.fedora40 stdout: Installing : m4-1.4.19-9.fc40.x86_64 22/43 2024-09-18 15:23:25 INFO system.fedora40 stdout: Installing : autoconf-2.71-10.fc40.noarch 23/43 2024-09-18 15:23:25 INFO system.fedora40 stdout: Installing : automake-1.16.5-16.fc40.noarch 24/43 2024-09-18 15:23:25 INFO system.fedora40 stdout: Installing : libjpeg-turbo-3.0.2-1.fc40.x86_64 25/43 2024-09-18 15:23:25 INFO system.fedora40 stdout: Installing : hdf-libs-4.2.16.2-1.fc40.x86_64 26/43 2024-09-18 15:23:25 INFO system.fedora40 stdout: Installing : netcdf-4.9.2-5.fc40.x86_64 27/43 2024-09-18 15:23:26 INFO system.fedora40 stdout: Installing : netcdf-cxx-4.2-34.fc40.x86_64 28/43 2024-09-18 15:23:27 INFO system.fedora40 stdout: Running scriptlet: netcdf-cxx-4.2-34.fc40.x86_64 28/43 2024-09-18 15:23:28 INFO system.fedora40 stdout: Installing : gc-8.2.2-6.fc40.x86_64 29/43 2024-09-18 15:23:28 INFO system.fedora40 stdout: Installing : guile30-3.0.7-12.fc40.x86_64 30/43 2024-09-18 15:23:30 INFO system.fedora40 stdout: Installing : make-1:4.4.1-6.fc40.x86_64 31/43 2024-09-18 15:23:30 INFO system.fedora40 stdout: Installing : gcc-14.2.1-1.fc40.x86_64 32/43 2024-09-18 15:23:30 INFO system.fedora40 stdout: Running scriptlet: gcc-14.2.1-1.fc40.x86_64 32/43 2024-09-18 15:23:30 INFO system.fedora40 stdout: Installing : libquadmath-devel-14.2.1-1.fc40.x86_64 33/43 2024-09-18 15:23:30 INFO system.fedora40 stdout: Installing : gcc-gfortran-14.2.1-1.fc40.x86_64 34/43 2024-09-18 15:23:30 INFO system.fedora40 stdout: Installing : cmake-filesystem-3.28.2-1.fc40.x86_64 35/43 2024-09-18 15:23:31 INFO system.fedora40 stdout: Installing : zlib-ng-compat-devel-2.1.7-2.fc40.x86_64 36/43 2024-09-18 15:23:31 INFO system.fedora40 stdout: Installing : hdf5-devel-1.12.1-15.fc40.x86_64 37/43 2024-09-18 15:23:31 INFO system.fedora40 stdout: Installing : netcdf-devel-4.9.2-5.fc40.x86_64 38/43 2024-09-18 15:23:31 INFO system.fedora40 stdout: Installing : netcdf-cxx-devel-4.2-34.fc40.x86_64 39/43 2024-09-18 15:23:31 INFO system.fedora40 stdout: Installing : libtool-2.4.7-10.fc40.x86_64 40/43 2024-09-18 15:23:31 INFO system.fedora40 stdout: Installing : annobin-plugin-gcc-12.60-1.fc40.x86_64 41/43 2024-09-18 15:23:31 INFO system.fedora40 stdout: Running scriptlet: annobin-plugin-gcc-12.60-1.fc40.x86_64 41/43 2024-09-18 15:23:31 INFO system.fedora40 stdout: Installing : gcc-c++-14.2.1-1.fc40.x86_64 42/43 2024-09-18 15:23:31 INFO system.fedora40 stdout: Installing : gcc-plugin-annobin-14.2.1-1.fc40.x86_64 43/43 2024-09-18 15:23:35 INFO system.fedora40 stdout: Running scriptlet: gcc-plugin-annobin-14.2.1-1.fc40.x86_64 43/43 2024-09-18 15:23:35 INFO system.fedora40 stdout: 2024-09-18 15:23:35 INFO system.fedora40 stdout: Installed: 2024-09-18 15:23:35 INFO system.fedora40 stdout: annobin-docs-12.60-1.fc40.noarch 2024-09-18 15:23:35 INFO system.fedora40 stdout: annobin-plugin-gcc-12.60-1.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: autoconf-2.71-10.fc40.noarch 2024-09-18 15:23:35 INFO system.fedora40 stdout: automake-1.16.5-16.fc40.noarch 2024-09-18 15:23:35 INFO system.fedora40 stdout: blosc-1.21.6-1.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: cmake-filesystem-3.28.2-1.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: cpp-14.2.1-1.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: gc-8.2.2-6.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: gcc-14.2.1-1.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: gcc-c++-14.2.1-1.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: gcc-gfortran-14.2.1-1.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: gcc-plugin-annobin-14.2.1-1.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: glibc-devel-2.39-22.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: glibc-headers-x86-2.39-22.fc40.noarch 2024-09-18 15:23:35 INFO system.fedora40 stdout: guile30-3.0.7-12.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: hdf-libs-4.2.16.2-1.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: hdf5-1.12.1-15.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: hdf5-devel-1.12.1-15.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: kernel-headers-6.10.3-200.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: libaec-1.1.2-1.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: libaec-devel-1.1.2-1.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: libcurl-devel-8.6.0-10.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: libgfortran-14.2.1-1.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: libjpeg-turbo-3.0.2-1.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: libmpc-1.3.1-5.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: libquadmath-14.2.1-1.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: libquadmath-devel-14.2.1-1.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: libstdc++-devel-14.2.1-1.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: libtool-2.4.7-10.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: libxcrypt-devel-4.4.36-5.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: m4-1.4.19-9.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: make-1:4.4.1-6.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: netcdf-4.9.2-5.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: netcdf-cxx-4.2-34.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: netcdf-cxx-devel-4.2-34.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: netcdf-devel-4.9.2-5.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: perl-File-Compare-1.100.700-506.fc40.noarch 2024-09-18 15:23:35 INFO system.fedora40 stdout: perl-File-Copy-2.41-506.fc40.noarch 2024-09-18 15:23:35 INFO system.fedora40 stdout: perl-Thread-Queue-3.14-503.fc40.noarch 2024-09-18 15:23:35 INFO system.fedora40 stdout: perl-threads-1:2.36-503.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: perl-threads-shared-1.68-502.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: snappy-1.1.10-4.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: zlib-ng-compat-devel-2.1.7-2.fc40.x86_64 2024-09-18 15:23:35 INFO system.fedora40 stdout: 2024-09-18 15:23:35 INFO system.fedora40 stdout: Complete! 2024-09-18 15:23:35 INFO system.fedora40.run /srv/moncic-ci/source/cdo-rpm# spectool -g -R cdo.spec 2024-09-18 15:23:37 INFO system.fedora40 stderr: N/A% of 12.7 MiB | | Elapsed Time: 0:00:00 ETA: --:--:-- 2024-09-18 15:23:37 INFO system.fedora40 stderr: 0% of 12.7 MiB | | Elapsed Time: 0:00:00 ETA: 0:00:18 2024-09-18 15:23:37 INFO system.fedora40 stderr: 2% of 12.7 MiB | | Elapsed Time: 0:00:00 ETA: 0:00:18 2024-09-18 15:23:37 INFO system.fedora40 stderr: 6% of 12.7 MiB |# | Elapsed Time: 0:00:00 ETA: 0:00:03 2024-09-18 15:23:37 INFO system.fedora40 stderr: 15% of 12.7 MiB |### | Elapsed Time: 0:00:00 ETA: 0:00:03 2024-09-18 15:23:37 INFO system.fedora40 stderr: 27% of 12.7 MiB |###### | Elapsed Time: 0:00:00 ETA: 0:00:00 2024-09-18 15:23:37 INFO system.fedora40 stderr: 41% of 12.7 MiB |######### | Elapsed Time: 0:00:00 ETA: 0:00:00 2024-09-18 15:23:37 INFO system.fedora40 stderr: 55% of 12.7 MiB |############ | Elapsed Time: 0:00:00 ETA: 0:00:00 2024-09-18 15:23:37 INFO system.fedora40 stderr: 70% of 12.7 MiB |############### | Elapsed Time: 0:00:00 ETA: 0:00:00 2024-09-18 15:23:37 INFO system.fedora40 stderr: 93% of 12.7 MiB |#################### | Elapsed Time: 0:00:00 ETA: 0:00:00 2024-09-18 15:23:37 INFO system.fedora40 stderr: 100% of 12.7 MiB |######################| Elapsed Time: 0:00:00 Time: 0:00:00 2024-09-18 15:23:37 INFO system.fedora40 stdout: Downloading: https://code.mpimet.mpg.de/attachments/download/28013/cdo-2.2.0.tar.gz 2024-09-18 15:23:37 INFO system.fedora40 stdout: Downloaded: cdo-2.2.0.tar.gz 2024-09-18 15:23:37 INFO system.fedora40.run /srv/moncic-ci/source/cdo-rpm# rpmbuild -ba cdo.spec 2024-09-18 15:23:37 INFO system.fedora40 stdout: setting SOURCE_DATE_EPOCH=1684454400 2024-09-18 15:23:37 INFO system.fedora40 stdout: Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.qwRK5W 2024-09-18 15:23:37 INFO system.fedora40 stderr: + umask 022 2024-09-18 15:23:37 INFO system.fedora40 stderr: + cd /root/rpmbuild/BUILD 2024-09-18 15:23:37 INFO system.fedora40 stderr: + cd /root/rpmbuild/BUILD 2024-09-18 15:23:37 INFO system.fedora40 stderr: + rm -rf cdo-2.2.0 2024-09-18 15:23:37 INFO system.fedora40 stderr: + /usr/lib/rpm/rpmuncompress -x -v /root/rpmbuild/SOURCES/cdo-2.2.0.tar.gz 2024-09-18 15:23:38 INFO system.fedora40 stderr: /usr/bin/gzip -dc '/root/rpmbuild/SOURCES/cdo-2.2.0.tar.gz' | /usr/bin/tar -xvvof - 2024-09-18 15:23:38 INFO system.fedora40 stdout: drwxr-xr-x m214003/staff 0 2023-04-24 20:12 cdo-2.2.0/ 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 2075 2020-11-18 13:47 cdo-2.2.0/acinclude.m4 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 1962 2023-04-21 09:26 cdo-2.2.0/cdo.spec 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 12236 2023-04-21 09:01 cdo-2.2.0/configure.ac 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 9236 2020-11-18 13:47 cdo-2.2.0/INSTALL 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 1550 2023-04-21 09:26 cdo-2.2.0/LICENSE 2024-09-18 15:23:38 INFO system.fedora40 stdout: drwxr-xr-x m214003/staff 0 2023-04-24 20:12 cdo-2.2.0/test/ 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 41853 2023-04-21 09:03 cdo-2.2.0/OPERATORS 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rwxr-xr-x m214003/staff 1120191 2023-04-21 09:04 cdo-2.2.0/configure 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 136765 2023-04-24 20:11 cdo-2.2.0/ChangeLog 2024-09-18 15:23:38 INFO system.fedora40 stdout: drwxr-xr-x m214003/staff 0 2023-04-24 20:12 cdo-2.2.0/config/ 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 471 2021-10-29 18:00 cdo-2.2.0/AUTHORS 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 1974 2023-04-21 09:03 cdo-2.2.0/cdo.spec.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: drwxr-xr-x m214003/staff 0 2023-04-24 20:12 cdo-2.2.0/contrib/ 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 3297 2022-08-11 09:06 cdo-2.2.0/README 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 460 2023-04-21 09:01 cdo-2.2.0/Makefile.am 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 50967 2023-04-21 09:26 cdo-2.2.0/NEWS 2024-09-18 15:23:38 INFO system.fedora40 stdout: drwxr-xr-x m214003/staff 0 2023-04-24 20:11 cdo-2.2.0/m4/ 2024-09-18 15:23:38 INFO system.fedora40 stdout: drwxr-xr-x m214003/staff 0 2023-04-24 20:11 cdo-2.2.0/doc/ 2024-09-18 15:23:38 INFO system.fedora40 stdout: drwxr-xr-x m214003/staff 0 2023-04-24 20:11 cdo-2.2.0/libcdi/ 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 1893 2020-11-18 13:47 cdo-2.2.0/cdo.settings.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 30097 2023-04-21 09:04 cdo-2.2.0/Makefile.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 60380 2023-04-21 09:04 cdo-2.2.0/aclocal.m4 2024-09-18 15:23:38 INFO system.fedora40 stdout: drwxr-xr-x m214003/staff 0 2023-04-24 20:12 cdo-2.2.0/src/ 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 9645 2023-04-21 09:01 cdo-2.2.0/src/Rhopot.cc 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 34682 2023-04-21 09:01 cdo-2.2.0/src/Selbox.cc 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 8943 2023-04-21 09:01 cdo-2.2.0/src/Cloudlayer.cc 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 2448 2023-04-21 09:01 cdo-2.2.0/src/remap_vars.h 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 9098 2023-04-21 09:01 cdo-2.2.0/src/Runstat.cc 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 3575 2023-04-21 09:01 cdo-2.2.0/src/cdo_fft.cc 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 310 2022-08-11 09:06 cdo-2.2.0/src/progress.h 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 4501 2023-04-21 09:01 cdo-2.2.0/src/Change_e5slm.cc 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 1463 2023-04-21 09:01 cdo-2.2.0/src/pipeStream.h 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 12689 2023-04-21 09:01 cdo-2.2.0/src/percentiles.cc 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 4435 2023-04-21 09:01 cdo-2.2.0/src/Tests.cc 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 71424 2022-08-11 09:06 cdo-2.2.0/src/after_fctrans.cc 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 352840 2023-04-21 09:03 cdo-2.2.0/src/operator_help.h 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 251 2021-10-29 18:00 cdo-2.2.0/src/cdo_fill.h 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 15127 2023-04-21 09:03 cdo-2.2.0/src/Info.cc 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 6927 2023-04-21 09:01 cdo-2.2.0/src/mapping.cc 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 8961 2023-04-21 09:26 cdo-2.2.0/src/CDIwrite.cc 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 27327 2023-04-21 09:01 cdo-2.2.0/src/remap_scrip_io.cc 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 15186 2023-04-21 09:26 cdo-2.2.0/src/datetime.cc 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 7879 2023-04-21 09:01 cdo-2.2.0/src/Harmonic.cc 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 806 2022-08-11 09:06 cdo-2.2.0/src/cthread_debug.cc 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 5377 2023-04-21 09:01 cdo-2.2.0/src/Set.cc 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 820 2021-10-29 18:00 cdo-2.2.0/src/cdo_task.h 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 8377 2023-04-21 09:01 cdo-2.2.0/src/Timselstat.cc 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 1287 2023-04-21 09:03 cdo-2.2.0/src/cdo_syntax_error.cc 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 12614 2023-04-21 09:03 cdo-2.2.0/src/Math.cc 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 20297 2023-04-21 09:26 cdo-2.2.0/src/modules.cc 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 726 2023-04-21 09:01 cdo-2.2.0/src/util_date.h 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 16247 2023-04-21 09:26 cdo-2.2.0/src/CMOR_lite.cc 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 7425 2023-04-21 09:01 cdo-2.2.0/src/Consecstat.cc 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 1014 2023-04-21 09:01 cdo-2.2.0/src/stdnametable.h 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 40306 2023-04-21 09:01 cdo-2.2.0/src/remap_conserv.cc 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 962 2023-04-21 09:03 cdo-2.2.0/src/table.cc 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 800 2023-04-21 09:01 cdo-2.2.0/src/cdo_zaxis.h 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 10410 2023-04-21 09:01 cdo-2.2.0/src/Invert.cc 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 5113 2023-04-21 09:01 cdo-2.2.0/src/specspace.h 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 1348 2023-04-21 09:01 cdo-2.2.0/src/remap_store_link.h 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 349 2021-10-29 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2264 2023-04-21 09:01 cdo-2.2.0/test/pytest/Vargen.py.test.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 628 2023-04-21 09:01 cdo-2.2.0/test/pytest/Ydrunstat.py.test.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 1137 2023-04-21 09:01 cdo-2.2.0/test/pytest/Remap3.py.test.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 509 2023-04-21 09:01 cdo-2.2.0/test/pytest/Ydrunpctl.py.test.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 2192 2023-04-21 09:01 cdo-2.2.0/test/pytest/Remap4.py.test.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 1513 2023-04-21 09:01 cdo-2.2.0/test/pytest/Remap_extra_file.py.test.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 680 2023-04-21 09:01 cdo-2.2.0/test/pytest/Timselpctl.py.test.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 6796 2023-04-21 09:01 cdo-2.2.0/test/pytest/cdoTest.py.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 479 2023-04-21 09:01 cdo-2.2.0/test/pytest/Inttime.py.test.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 670 2023-04-21 09:01 cdo-2.2.0/test/pytest/Timselstat.py.test.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 1480 2023-04-21 09:01 cdo-2.2.0/test/pytest/Ydayarith.py.test.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 515 2023-04-21 09:01 cdo-2.2.0/test/pytest/Filter.py.test.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 497 2023-04-21 09:01 cdo-2.2.0/test/pytest/Vertstat.py.test.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 1329 2023-04-21 09:01 cdo-2.2.0/test/pytest/Multiyearstat.py.test.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 780 2023-04-21 09:01 cdo-2.2.0/test/pytest/Expr.py.test.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 509 2023-04-21 09:01 cdo-2.2.0/test/pytest/Merstat.py.test.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 48732 2023-04-21 09:04 cdo-2.2.0/test/pytest/Makefile.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 603 2023-04-21 09:01 cdo-2.2.0/test/pytest/userInput.py.test.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 494 2023-04-21 09:01 cdo-2.2.0/test/pytest/Varsstat.py.test.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 1220 2023-04-21 09:01 cdo-2.2.0/test/pytest/Remap_extra.py.test.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 936 2023-04-21 09:01 cdo-2.2.0/test/pytest/Runstat.py.test.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 606 2023-04-21 09:01 cdo-2.2.0/test/pytest/Remapeta.py.test.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 1670 2023-04-21 09:01 cdo-2.2.0/test/pytest/Arith.py.test.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 797 2023-04-21 09:01 cdo-2.2.0/test/pytest/Magvector.py.test.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 604 2023-04-21 09:01 cdo-2.2.0/test/pytest/Wind.py.test.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 489 2023-04-21 09:01 cdo-2.2.0/test/pytest/Runpctl.py.test.in 2024-09-18 15:23:38 INFO system.fedora40 stdout: -rw-r--r-- m214003/staff 706 2023-04-21 09:01 cdo-2.2.0/test/pytest/Change.py.test.in 2024-09-18 15:23:38 INFO system.fedora40 stderr: + STATUS=0 2024-09-18 15:23:38 INFO system.fedora40 stderr: + '[' 0 -ne 0 ']' 2024-09-18 15:23:38 INFO system.fedora40 stderr: + cd cdo-2.2.0 2024-09-18 15:23:38 INFO system.fedora40 stderr: + rm -rf /root/rpmbuild/BUILD/cdo-2.2.0-SPECPARTS 2024-09-18 15:23:38 INFO system.fedora40 stderr: + /usr/bin/mkdir -p /root/rpmbuild/BUILD/cdo-2.2.0-SPECPARTS 2024-09-18 15:23:39 INFO system.fedora40 stderr: + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . 2024-09-18 15:23:39 INFO system.fedora40 stderr: + RPM_EC=0 2024-09-18 15:23:39 INFO system.fedora40 stderr: ++ jobs -p 2024-09-18 15:23:39 INFO system.fedora40 stderr: + exit 0 2024-09-18 15:23:39 INFO system.fedora40 stdout: Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.r0oMgB 2024-09-18 15:23:39 INFO system.fedora40 stderr: + umask 022 2024-09-18 15:23:39 INFO system.fedora40 stderr: + cd /root/rpmbuild/BUILD 2024-09-18 15:23:39 INFO system.fedora40 stderr: + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' 2024-09-18 15:23:39 INFO system.fedora40 stderr: + export CFLAGS 2024-09-18 15:23:39 INFO system.fedora40 stderr: + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' 2024-09-18 15:23:39 INFO system.fedora40 stderr: + export CXXFLAGS 2024-09-18 15:23:39 INFO system.fedora40 stderr: + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' 2024-09-18 15:23:39 INFO system.fedora40 stderr: + export FFLAGS 2024-09-18 15:23:39 INFO system.fedora40 stderr: + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' 2024-09-18 15:23:39 INFO system.fedora40 stderr: + export FCFLAGS 2024-09-18 15:23:39 INFO system.fedora40 stderr: + VALAFLAGS=-g 2024-09-18 15:23:39 INFO system.fedora40 stderr: + export VALAFLAGS 2024-09-18 15:23:39 INFO system.fedora40 stderr: + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' 2024-09-18 15:23:39 INFO system.fedora40 stderr: + export RUSTFLAGS 2024-09-18 15:23:39 INFO system.fedora40 stderr: + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' 2024-09-18 15:23:39 INFO system.fedora40 stderr: + export LDFLAGS 2024-09-18 15:23:39 INFO system.fedora40 stderr: + LT_SYS_LIBRARY_PATH=/usr/lib64: 2024-09-18 15:23:39 INFO system.fedora40 stderr: + export LT_SYS_LIBRARY_PATH 2024-09-18 15:23:39 INFO system.fedora40 stderr: + CC=gcc 2024-09-18 15:23:39 INFO system.fedora40 stderr: + export CC 2024-09-18 15:23:39 INFO system.fedora40 stderr: + CXX=g++ 2024-09-18 15:23:39 INFO system.fedora40 stderr: + export CXX 2024-09-18 15:23:39 INFO system.fedora40 stderr: + cd cdo-2.2.0 2024-09-18 15:23:39 INFO system.fedora40 stderr: + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' 2024-09-18 15:23:39 INFO system.fedora40 stderr: + export CFLAGS 2024-09-18 15:23:39 INFO system.fedora40 stderr: + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' 2024-09-18 15:23:39 INFO system.fedora40 stderr: + export CXXFLAGS 2024-09-18 15:23:39 INFO system.fedora40 stderr: + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' 2024-09-18 15:23:39 INFO system.fedora40 stderr: + export FFLAGS 2024-09-18 15:23:39 INFO system.fedora40 stderr: + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' 2024-09-18 15:23:39 INFO system.fedora40 stderr: + export FCFLAGS 2024-09-18 15:23:39 INFO system.fedora40 stderr: + VALAFLAGS=-g 2024-09-18 15:23:39 INFO system.fedora40 stderr: + export VALAFLAGS 2024-09-18 15:23:39 INFO system.fedora40 stderr: + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' 2024-09-18 15:23:39 INFO system.fedora40 stderr: + export RUSTFLAGS 2024-09-18 15:23:39 INFO system.fedora40 stderr: + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' 2024-09-18 15:23:39 INFO system.fedora40 stderr: + export LDFLAGS 2024-09-18 15:23:39 INFO system.fedora40 stderr: + LT_SYS_LIBRARY_PATH=/usr/lib64: 2024-09-18 15:23:39 INFO system.fedora40 stderr: + export LT_SYS_LIBRARY_PATH 2024-09-18 15:23:39 INFO system.fedora40 stderr: + CC=gcc 2024-09-18 15:23:39 INFO system.fedora40 stderr: + export CC 2024-09-18 15:23:39 INFO system.fedora40 stderr: + CXX=g++ 2024-09-18 15:23:39 INFO system.fedora40 stderr: + export CXX 2024-09-18 15:23:39 INFO system.fedora40 stderr: + '[' '-flto=auto -ffat-lto-objectsx' '!=' x ']' 2024-09-18 15:23:39 INFO system.fedora40 stderr: ++ find . -type f -name configure -print 2024-09-18 15:23:39 INFO system.fedora40 stderr: + for file in $(find . -type f -name configure -print) 2024-09-18 15:23:39 INFO system.fedora40 stderr: + /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./configure 2024-09-18 15:23:39 INFO system.fedora40 stderr: + diff -u ./configure.backup ./configure 2024-09-18 15:23:39 INFO system.fedora40 stderr: + mv ./configure.backup ./configure 2024-09-18 15:23:39 INFO system.fedora40 stderr: + /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./configure 2024-09-18 15:23:39 INFO system.fedora40 stderr: + diff -u ./configure.backup ./configure 2024-09-18 15:23:39 INFO system.fedora40 stderr: + mv ./configure.backup ./configure 2024-09-18 15:23:39 INFO system.fedora40 stderr: + /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./configure 2024-09-18 15:23:39 INFO system.fedora40 stderr: + diff -u ./configure.backup ./configure 2024-09-18 15:23:39 INFO system.fedora40 stdout: --- ./configure.backup 2023-04-21 09:04:42.000000000 +0200 2024-09-18 15:23:39 INFO system.fedora40 stdout: +++ ./configure 2024-09-18 15:23:39.366386109 +0200 2024-09-18 15:23:39 INFO system.fedora40 stdout: @@ -1988,7 +1988,7 @@ 2024-09-18 15:23:39 INFO system.fedora40 stdout: #ifdef __cplusplus 2024-09-18 15:23:39 INFO system.fedora40 stdout: extern "C" 2024-09-18 15:23:39 INFO system.fedora40 stdout: #endif 2024-09-18 15:23:39 INFO system.fedora40 stdout: -char $2 (); 2024-09-18 15:23:39 INFO system.fedora40 stdout: +__attribute__ ((used)) char $2 (); 2024-09-18 15:23:39 INFO system.fedora40 stdout: /* The GNU C library defines this for functions which it implements 2024-09-18 15:23:39 INFO system.fedora40 stdout: to always fail with ENOSYS. Some functions are actually named 2024-09-18 15:23:39 INFO system.fedora40 stdout: something starting with __ and the normal name is an alias. */ 2024-09-18 15:23:39 INFO system.fedora40 stderr: + /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./configure 2024-09-18 15:23:39 INFO system.fedora40 stderr: + diff -u ./configure.backup ./configure 2024-09-18 15:23:39 INFO system.fedora40 stderr: + mv ./configure.backup ./configure 2024-09-18 15:23:39 INFO system.fedora40 stderr: + /usr/bin/sed --in-place=.backup 's#^lt_cv_sys_global_symbol_to_cdecl=.*#lt_cv_sys_global_symbol_to_cdecl="sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./configure 2024-09-18 15:23:39 INFO system.fedora40 stderr: + diff -u ./configure.backup ./configure 2024-09-18 15:23:39 INFO system.fedora40 stdout: --- ./configure.backup 2024-09-18 15:23:39.366386109 +0200 2024-09-18 15:23:39 INFO system.fedora40 stdout: +++ ./configure 2024-09-18 15:23:39.430385790 +0200 2024-09-18 15:23:39 INFO system.fedora40 stdout: @@ -7872,7 +7872,7 @@ 2024-09-18 15:23:39 INFO system.fedora40 stdout: # Transform an extracted symbol line into a proper C declaration. 2024-09-18 15:23:39 INFO system.fedora40 stdout: # Some systems (esp. on ia64) link data and code symbols differently, 2024-09-18 15:23:39 INFO system.fedora40 stdout: # so use this general approach. 2024-09-18 15:23:39 INFO system.fedora40 stdout: -lt_cv_sys_global_symbol_to_cdecl="$SED -n"\ 2024-09-18 15:23:39 INFO system.fedora40 stdout: +lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'" 2024-09-18 15:23:39 INFO system.fedora40 stdout: $lt_cdecl_hook\ 2024-09-18 15:23:39 INFO system.fedora40 stdout: " -e 's/^T .* \(.*\)$/extern int \1();/p'"\ 2024-09-18 15:23:39 INFO system.fedora40 stdout: " -e 's/^$symcode$symcode* .* \(.*\)$/extern char \1;/p'" 2024-09-18 15:23:39 INFO system.fedora40 stdout: @@ -34449,7 +34449,7 @@ 2024-09-18 15:23:39 INFO system.fedora40 stdout: compiler='`$ECHO "$compiler" | $SED "$delay_single_quote_subst"`' 2024-09-18 15:23:39 INFO system.fedora40 stdout: GCC='`$ECHO "$GCC" | $SED "$delay_single_quote_subst"`' 2024-09-18 15:23:39 INFO system.fedora40 stdout: lt_cv_sys_global_symbol_pipe='`$ECHO "$lt_cv_sys_global_symbol_pipe" | $SED "$delay_single_quote_subst"`' 2024-09-18 15:23:39 INFO system.fedora40 stdout: -lt_cv_sys_global_symbol_to_cdecl='`$ECHO "$lt_cv_sys_global_symbol_to_cdecl" | $SED "$delay_single_quote_subst"`' 2024-09-18 15:23:39 INFO system.fedora40 stdout: +lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'" 2024-09-18 15:23:39 INFO system.fedora40 stdout: lt_cv_sys_global_symbol_to_import='`$ECHO "$lt_cv_sys_global_symbol_to_import" | $SED "$delay_single_quote_subst"`' 2024-09-18 15:23:39 INFO system.fedora40 stdout: lt_cv_sys_global_symbol_to_c_name_address='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address" | $SED "$delay_single_quote_subst"`' 2024-09-18 15:23:39 INFO system.fedora40 stdout: lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address_lib_prefix" | $SED "$delay_single_quote_subst"`' 2024-09-18 15:23:39 INFO system.fedora40 stderr: + for file in $(find . -type f -name configure -print) 2024-09-18 15:23:39 INFO system.fedora40 stderr: + /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./libcdi/configure 2024-09-18 15:23:39 INFO system.fedora40 stderr: + diff -u ./libcdi/configure.backup ./libcdi/configure 2024-09-18 15:23:39 INFO system.fedora40 stderr: + mv ./libcdi/configure.backup ./libcdi/configure 2024-09-18 15:23:39 INFO system.fedora40 stderr: + /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./libcdi/configure 2024-09-18 15:23:39 INFO system.fedora40 stderr: + diff -u ./libcdi/configure.backup ./libcdi/configure 2024-09-18 15:23:39 INFO system.fedora40 stderr: + mv ./libcdi/configure.backup ./libcdi/configure 2024-09-18 15:23:39 INFO system.fedora40 stderr: + /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./libcdi/configure 2024-09-18 15:23:39 INFO system.fedora40 stderr: + diff -u ./libcdi/configure.backup ./libcdi/configure 2024-09-18 15:23:39 INFO system.fedora40 stdout: --- ./libcdi/configure.backup 2023-04-16 14:27:31.000000000 +0200 2024-09-18 15:23:39 INFO system.fedora40 stdout: +++ ./libcdi/configure 2024-09-18 15:23:39.606384911 +0200 2024-09-18 15:23:39 INFO system.fedora40 stdout: @@ -2560,7 +2560,7 @@ 2024-09-18 15:23:39 INFO system.fedora40 stdout: #ifdef __cplusplus 2024-09-18 15:23:39 INFO system.fedora40 stdout: extern "C" 2024-09-18 15:23:39 INFO system.fedora40 stdout: #endif 2024-09-18 15:23:39 INFO system.fedora40 stdout: -char $2 (); 2024-09-18 15:23:39 INFO system.fedora40 stdout: +__attribute__ ((used)) char $2 (); 2024-09-18 15:23:39 INFO system.fedora40 stdout: /* The GNU C library defines this for functions which it implements 2024-09-18 15:23:39 INFO system.fedora40 stdout: to always fail with ENOSYS. Some functions are actually named 2024-09-18 15:23:39 INFO system.fedora40 stdout: something starting with __ and the normal name is an alias. */ 2024-09-18 15:23:39 INFO system.fedora40 stderr: + /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./libcdi/configure 2024-09-18 15:23:39 INFO system.fedora40 stderr: + diff -u ./libcdi/configure.backup ./libcdi/configure 2024-09-18 15:23:39 INFO system.fedora40 stderr: + mv ./libcdi/configure.backup ./libcdi/configure 2024-09-18 15:23:39 INFO system.fedora40 stderr: + /usr/bin/sed --in-place=.backup 's#^lt_cv_sys_global_symbol_to_cdecl=.*#lt_cv_sys_global_symbol_to_cdecl="sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./libcdi/configure 2024-09-18 15:23:39 INFO system.fedora40 stderr: + diff -u ./libcdi/configure.backup ./libcdi/configure 2024-09-18 15:23:39 INFO system.fedora40 stdout: --- ./libcdi/configure.backup 2024-09-18 15:23:39.606384911 +0200 2024-09-18 15:23:39 INFO system.fedora40 stdout: +++ ./libcdi/configure 2024-09-18 15:23:39.714384372 +0200 2024-09-18 15:23:39 INFO system.fedora40 stdout: @@ -10757,7 +10757,7 @@ 2024-09-18 15:23:39 INFO system.fedora40 stdout: # Transform an extracted symbol line into a proper C declaration. 2024-09-18 15:23:39 INFO system.fedora40 stdout: # Some systems (esp. on ia64) link data and code symbols differently, 2024-09-18 15:23:39 INFO system.fedora40 stdout: # so use this general approach. 2024-09-18 15:23:39 INFO system.fedora40 stdout: -lt_cv_sys_global_symbol_to_cdecl="$SED -n"\ 2024-09-18 15:23:39 INFO system.fedora40 stdout: +lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'" 2024-09-18 15:23:39 INFO system.fedora40 stdout: $lt_cdecl_hook\ 2024-09-18 15:23:39 INFO system.fedora40 stdout: " -e 's/^T .* \(.*\)$/extern int \1();/p'"\ 2024-09-18 15:23:39 INFO system.fedora40 stdout: " -e 's/^$symcode$symcode* .* \(.*\)$/extern char \1;/p'" 2024-09-18 15:23:39 INFO system.fedora40 stdout: @@ -26653,7 +26653,7 @@ 2024-09-18 15:23:39 INFO system.fedora40 stdout: compiler='`$ECHO "$compiler" | $SED "$delay_single_quote_subst"`' 2024-09-18 15:23:39 INFO system.fedora40 stdout: GCC='`$ECHO "$GCC" | $SED "$delay_single_quote_subst"`' 2024-09-18 15:23:39 INFO system.fedora40 stdout: lt_cv_sys_global_symbol_pipe='`$ECHO "$lt_cv_sys_global_symbol_pipe" | $SED "$delay_single_quote_subst"`' 2024-09-18 15:23:39 INFO system.fedora40 stdout: -lt_cv_sys_global_symbol_to_cdecl='`$ECHO "$lt_cv_sys_global_symbol_to_cdecl" | $SED "$delay_single_quote_subst"`' 2024-09-18 15:23:39 INFO system.fedora40 stdout: +lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'" 2024-09-18 15:23:39 INFO system.fedora40 stdout: lt_cv_sys_global_symbol_to_import='`$ECHO "$lt_cv_sys_global_symbol_to_import" | $SED "$delay_single_quote_subst"`' 2024-09-18 15:23:39 INFO system.fedora40 stdout: lt_cv_sys_global_symbol_to_c_name_address='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address" | $SED "$delay_single_quote_subst"`' 2024-09-18 15:23:39 INFO system.fedora40 stdout: lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address_lib_prefix" | $SED "$delay_single_quote_subst"`' 2024-09-18 15:23:39 INFO system.fedora40 stdout: @@ -37514,7 +37514,7 @@ 2024-09-18 15:23:39 INFO system.fedora40 stdout: compiler='`$ECHO "$compiler" | $SED "$delay_single_quote_subst"`' 2024-09-18 15:23:39 INFO system.fedora40 stdout: GCC='`$ECHO "$GCC" | $SED "$delay_single_quote_subst"`' 2024-09-18 15:23:39 INFO system.fedora40 stdout: lt_cv_sys_global_symbol_pipe='`$ECHO "$lt_cv_sys_global_symbol_pipe" | $SED "$delay_single_quote_subst"`' 2024-09-18 15:23:39 INFO system.fedora40 stdout: -lt_cv_sys_global_symbol_to_cdecl='`$ECHO "$lt_cv_sys_global_symbol_to_cdecl" | $SED "$delay_single_quote_subst"`' 2024-09-18 15:23:39 INFO system.fedora40 stdout: +lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'" 2024-09-18 15:23:39 INFO system.fedora40 stdout: lt_cv_sys_global_symbol_to_import='`$ECHO "$lt_cv_sys_global_symbol_to_import" | $SED "$delay_single_quote_subst"`' 2024-09-18 15:23:39 INFO system.fedora40 stdout: lt_cv_sys_global_symbol_to_c_name_address='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address" | $SED "$delay_single_quote_subst"`' 2024-09-18 15:23:39 INFO system.fedora40 stdout: lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address_lib_prefix" | $SED "$delay_single_quote_subst"`' 2024-09-18 15:23:39 INFO system.fedora40 stderr: + '[' 1 = 1 ']' 2024-09-18 15:23:39 INFO system.fedora40 stderr: +++ dirname ./configure 2024-09-18 15:23:39 INFO system.fedora40 stderr: ++ find . -name config.guess -o -name config.sub 2024-09-18 15:23:39 INFO system.fedora40 stderr: + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) 2024-09-18 15:23:39 INFO system.fedora40 stderr: ++ basename ./config/config.guess 2024-09-18 15:23:39 INFO system.fedora40 stderr: + '[' -f /usr/lib/rpm/redhat/config.guess ']' 2024-09-18 15:23:39 INFO system.fedora40 stderr: + /usr/bin/rm -f ./config/config.guess 2024-09-18 15:23:39 INFO system.fedora40 stderr: ++ basename ./config/config.guess 2024-09-18 15:23:39 INFO system.fedora40 stderr: + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./config/config.guess 2024-09-18 15:23:39 INFO system.fedora40 stdout: '/usr/lib/rpm/redhat/config.guess' -> './config/config.guess' 2024-09-18 15:23:39 INFO system.fedora40 stderr: + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) 2024-09-18 15:23:39 INFO system.fedora40 stderr: ++ basename ./config/config.sub 2024-09-18 15:23:39 INFO system.fedora40 stderr: + '[' -f /usr/lib/rpm/redhat/config.sub ']' 2024-09-18 15:23:39 INFO system.fedora40 stderr: + /usr/bin/rm -f ./config/config.sub 2024-09-18 15:23:39 INFO system.fedora40 stderr: ++ basename ./config/config.sub 2024-09-18 15:23:39 INFO system.fedora40 stderr: + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./config/config.sub 2024-09-18 15:23:39 INFO system.fedora40 stdout: '/usr/lib/rpm/redhat/config.sub' -> './config/config.sub' 2024-09-18 15:23:39 INFO system.fedora40 stderr: + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) 2024-09-18 15:23:39 INFO system.fedora40 stderr: ++ basename ./libcdi/config/config.guess 2024-09-18 15:23:39 INFO system.fedora40 stderr: + '[' -f /usr/lib/rpm/redhat/config.guess ']' 2024-09-18 15:23:39 INFO system.fedora40 stderr: + /usr/bin/rm -f ./libcdi/config/config.guess 2024-09-18 15:23:39 INFO system.fedora40 stderr: ++ basename ./libcdi/config/config.guess 2024-09-18 15:23:39 INFO system.fedora40 stderr: + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./libcdi/config/config.guess 2024-09-18 15:23:39 INFO system.fedora40 stdout: '/usr/lib/rpm/redhat/config.guess' -> './libcdi/config/config.guess' 2024-09-18 15:23:39 INFO system.fedora40 stderr: + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) 2024-09-18 15:23:39 INFO system.fedora40 stderr: ++ basename ./libcdi/config/config.sub 2024-09-18 15:23:39 INFO system.fedora40 stderr: + '[' -f /usr/lib/rpm/redhat/config.sub ']' 2024-09-18 15:23:39 INFO system.fedora40 stderr: + /usr/bin/rm -f ./libcdi/config/config.sub 2024-09-18 15:23:39 INFO system.fedora40 stderr: ++ basename ./libcdi/config/config.sub 2024-09-18 15:23:39 INFO system.fedora40 stderr: + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./libcdi/config/config.sub 2024-09-18 15:23:39 INFO system.fedora40 stdout: '/usr/lib/rpm/redhat/config.sub' -> './libcdi/config/config.sub' 2024-09-18 15:23:39 INFO system.fedora40 stderr: + '[' 1 = 1 ']' 2024-09-18 15:23:39 INFO system.fedora40 stderr: + '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' ']' 2024-09-18 15:23:39 INFO system.fedora40 stderr: ++ find . -name ltmain.sh 2024-09-18 15:23:39 INFO system.fedora40 stderr: + for i in $(find . -name ltmain.sh) 2024-09-18 15:23:39 INFO system.fedora40 stderr: + /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld"~' ./config/ltmain.sh 2024-09-18 15:23:39 INFO system.fedora40 stderr: + for i in $(find . -name ltmain.sh) 2024-09-18 15:23:39 INFO system.fedora40 stderr: + /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld"~' ./libcdi/config/ltmain.sh 2024-09-18 15:23:39 INFO system.fedora40 stderr: ++ grep -q runstatedir=DIR ./configure 2024-09-18 15:23:39 INFO system.fedora40 stderr: ++ echo --runstatedir=/run 2024-09-18 15:23:39 INFO system.fedora40 stderr: + ./configure --build=x86_64-redhat-linux --host=x86_64-redhat-linux --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --runstatedir=/run --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --prefix=/usr --with-netcdf --with-hdf5 2024-09-18 15:23:40 INFO system.fedora40 stdout: checking build system type... x86_64-redhat-linux-gnu 2024-09-18 15:23:40 INFO system.fedora40 stdout: checking host system type... x86_64-redhat-linux-gnu 2024-09-18 15:23:40 INFO system.fedora40 stdout: checking for a BSD-compatible install... /usr/bin/install -c 2024-09-18 15:23:40 INFO system.fedora40 stdout: checking whether build environment is sane... yes 2024-09-18 15:23:40 INFO system.fedora40 stdout: checking for a race-free mkdir -p... /usr/bin/mkdir -p 2024-09-18 15:23:40 INFO system.fedora40 stdout: checking for gawk... gawk 2024-09-18 15:23:40 INFO system.fedora40 stdout: checking whether make sets $(MAKE)... yes 2024-09-18 15:23:40 INFO system.fedora40 stdout: checking whether make supports nested variables... yes 2024-09-18 15:23:40 INFO system.fedora40 stdout: checking whether to enable maintainer-specific portions of Makefiles... no 2024-09-18 15:23:40 INFO system.fedora40 stdout: checking whether make supports the include directive... yes (GNU style) 2024-09-18 15:23:40 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-gcc... gcc 2024-09-18 15:23:41 INFO system.fedora40 stdout: checking whether the C compiler works... yes 2024-09-18 15:23:41 INFO system.fedora40 stdout: checking for C compiler default output file name... a.out 2024-09-18 15:23:41 INFO system.fedora40 stdout: checking for suffix of executables... 2024-09-18 15:23:41 INFO system.fedora40 stdout: checking whether we are cross compiling... no 2024-09-18 15:23:41 INFO system.fedora40 stdout: checking for suffix of object files... o 2024-09-18 15:23:41 INFO system.fedora40 stdout: checking whether the compiler supports GNU C... yes 2024-09-18 15:23:41 INFO system.fedora40 stdout: checking whether gcc accepts -g... yes 2024-09-18 15:23:41 INFO system.fedora40 stdout: checking for gcc option to enable C11 features... none needed 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking whether gcc understands -c and -o together... yes 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking dependency style of gcc... none 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-ar... no 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-lib... no 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-link... no 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for ar... ar 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking the archiver (ar) interface... ar 2024-09-18 15:23:42 INFO system.fedora40 stdout: configure: setting up libtool 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking how to print strings... printf 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for a sed that does not truncate output... /usr/bin/sed 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for grep that handles long lines and -e... /usr/bin/grep 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for egrep... /usr/bin/grep -E 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for fgrep... /usr/bin/grep -F 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for ld used by gcc... /usr/bin/ld 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking if the linker (/usr/bin/ld) is GNU ld... yes 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking the name lister (/usr/bin/nm -B) interface... BSD nm 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking whether ln -s works... yes 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking the maximum length of command line arguments... 1572864 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking how to convert x86_64-redhat-linux-gnu file names to x86_64-redhat-linux-gnu format... func_convert_file_noop 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking how to convert x86_64-redhat-linux-gnu file names to toolchain format... func_convert_file_noop 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for /usr/bin/ld option to reload object files... -r 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-file... no 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for file... file 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-objdump... no 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for objdump... objdump 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking how to recognize dependent libraries... pass_all 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-dlltool... no 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for dlltool... no 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking how to associate runtime and link libraries... printf %s\n 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-ar... ar 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for archiver @FILE support... @ 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-strip... no 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for strip... strip 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-ranlib... no 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for ranlib... ranlib 2024-09-18 15:23:42 INFO system.fedora40 stderr: ./configure: line 7878: -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p': No such file or directory 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking command to parse /usr/bin/nm -B output from gcc object... ok 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for sysroot... no 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for a working dd... /usr/bin/dd 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-mt... no 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for mt... no 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking if : is a manifest tool... no 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for stdio.h... yes 2024-09-18 15:23:42 INFO system.fedora40 stdout: checking for stdlib.h... yes 2024-09-18 15:23:43 INFO system.fedora40 stdout: checking for string.h... yes 2024-09-18 15:23:43 INFO system.fedora40 stdout: checking for inttypes.h... yes 2024-09-18 15:23:43 INFO system.fedora40 stdout: checking for stdint.h... yes 2024-09-18 15:23:43 INFO system.fedora40 stdout: checking for strings.h... yes 2024-09-18 15:23:43 INFO system.fedora40 stdout: checking for sys/stat.h... yes 2024-09-18 15:23:43 INFO system.fedora40 stdout: checking for sys/types.h... yes 2024-09-18 15:23:43 INFO system.fedora40 stdout: checking for unistd.h... yes 2024-09-18 15:23:43 INFO system.fedora40 stdout: checking for sys/param.h... yes 2024-09-18 15:23:43 INFO system.fedora40 stdout: checking for dlfcn.h... yes 2024-09-18 15:23:43 INFO system.fedora40 stdout: checking for objdir... .libs 2024-09-18 15:23:43 INFO system.fedora40 stdout: checking if gcc supports -fno-rtti -fno-exceptions... no 2024-09-18 15:23:43 INFO system.fedora40 stdout: checking for gcc option to produce PIC... -fPIC -DPIC 2024-09-18 15:23:44 INFO system.fedora40 stdout: checking if gcc PIC flag -fPIC -DPIC works... yes 2024-09-18 15:23:44 INFO system.fedora40 stdout: checking if gcc static flag -static works... no 2024-09-18 15:23:44 INFO system.fedora40 stdout: checking if gcc supports -c -o file.o... yes 2024-09-18 15:23:44 INFO system.fedora40 stdout: checking if gcc supports -c -o file.o... (cached) yes 2024-09-18 15:23:44 INFO system.fedora40 stdout: checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes 2024-09-18 15:23:44 INFO system.fedora40 stdout: checking whether -lc should be explicitly linked in... no 2024-09-18 15:23:44 INFO system.fedora40 stdout: checking dynamic linker characteristics... GNU/Linux ld.so 2024-09-18 15:23:44 INFO system.fedora40 stdout: checking how to hardcode library paths into programs... immediate 2024-09-18 15:23:45 INFO system.fedora40 stdout: checking whether stripping libraries is possible... yes 2024-09-18 15:23:45 INFO system.fedora40 stdout: checking if libtool supports shared libraries... yes 2024-09-18 15:23:45 INFO system.fedora40 stdout: checking whether to build shared libraries... yes 2024-09-18 15:23:45 INFO system.fedora40 stdout: checking whether to build static libraries... yes 2024-09-18 15:23:45 INFO system.fedora40 stdout: checking for a Python interpreter with version >= 3.6... python 2024-09-18 15:23:45 INFO system.fedora40 stdout: checking for python... /usr/bin/python 2024-09-18 15:23:45 INFO system.fedora40 stdout: checking for python version... 3.12 2024-09-18 15:23:45 INFO system.fedora40 stdout: checking for python platform... linux 2024-09-18 15:23:45 INFO system.fedora40 stdout: checking for GNU default python prefix... ${prefix} 2024-09-18 15:23:45 INFO system.fedora40 stdout: checking for GNU default python exec_prefix... ${exec_prefix} 2024-09-18 15:23:45 INFO system.fedora40 stdout: checking for python script directory (pythondir)... ${PYTHON_PREFIX}/lib/python3.12/site-packages 2024-09-18 15:23:45 INFO system.fedora40 stdout: checking for python extension module directory (pyexecdir)... ${PYTHON_EXEC_PREFIX}/lib64/python3.12/site-packages 2024-09-18 15:23:45 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-bash... /bin/sh 2024-09-18 15:23:45 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-gcc... (cached) gcc 2024-09-18 15:23:45 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-g++... g++ 2024-09-18 15:23:45 INFO system.fedora40 stdout: checking whether the compiler supports GNU C++... yes 2024-09-18 15:23:45 INFO system.fedora40 stdout: checking whether g++ accepts -g... yes 2024-09-18 15:23:45 INFO system.fedora40 stdout: checking for g++ option to enable C++11 features... none needed 2024-09-18 15:23:45 INFO system.fedora40 stdout: checking dependency style of g++... none 2024-09-18 15:23:45 INFO system.fedora40 stdout: checking how to run the C++ preprocessor... g++ -E 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for ld used by g++... /usr/bin/ld -m elf_x86_64 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for g++ option to produce PIC... -fPIC -DPIC 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking if g++ PIC flag -fPIC -DPIC works... yes 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking if g++ static flag -static works... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking if g++ supports -c -o file.o... yes 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking if g++ supports -c -o file.o... (cached) yes 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking dynamic linker characteristics... (cached) GNU/Linux ld.so 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking how to hardcode library paths into programs... immediate 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-g77... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-xlf... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-f77... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-frt... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-pgf77... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-cf77... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-fort77... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-fl32... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-af77... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-xlf90... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-f90... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-pgf90... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-pghpf... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-epcf90... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-gfortran... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-g95... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-xlf95... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-f95... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-fort... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-ifort... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-ifc... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-efc... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-pgfortran... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-pgf95... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-lf95... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-ftn... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-nagfor... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for g77... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for xlf... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for f77... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for frt... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for pgf77... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for cf77... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for fort77... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for fl32... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for af77... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for xlf90... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for f90... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for pgf90... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for pghpf... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for epcf90... no 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking for gfortran... gfortran 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking whether the compiler supports GNU Fortran 77... yes 2024-09-18 15:23:46 INFO system.fedora40 stdout: checking whether gfortran accepts -g... yes 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking if libtool supports shared libraries... yes 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking whether to build shared libraries... yes 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking whether to build static libraries... yes 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking for gfortran option to produce PIC... -fPIC 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking if gfortran PIC flag -fPIC works... yes 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking if gfortran static flag -static works... no 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking if gfortran supports -c -o file.o... yes 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking if gfortran supports -c -o file.o... (cached) yes 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking dynamic linker characteristics... (cached) GNU/Linux ld.so 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking how to hardcode library paths into programs... immediate 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking for C/C++ restrict keyword... __restrict__ 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking whether g++ supports C++17 features by default... yes 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking for gcc option to support OpenMP... -fopenmp 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-ar... (cached) ar 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-cpp... no 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking for cpp... cpp 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-ld... /usr/bin/ld -m elf_x86_64 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-nm... /usr/bin/nm -B 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-ar... (cached) ar 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-as... no 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking for as... as 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-dlltool... false 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-objdump... objdump 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-strip... strip 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-ranlib... ranlib 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking for special C compiler options needed for large files... no 2024-09-18 15:23:47 INFO system.fedora40 stdout: checking for _FILE_OFFSET_BITS value needed for large files... no 2024-09-18 15:23:48 INFO system.fedora40 stdout: checking for getpagesize... yes 2024-09-18 15:23:48 INFO system.fedora40 stdout: checking for working mmap... yes 2024-09-18 15:23:48 INFO system.fedora40 stdout: checking for struct stat.st_blksize... yes 2024-09-18 15:23:48 INFO system.fedora40 stdout: checking for sys/resource.h... yes 2024-09-18 15:23:48 INFO system.fedora40 stdout: checking for sys/times.h... yes 2024-09-18 15:23:48 INFO system.fedora40 stdout: checking for malloc.h... yes 2024-09-18 15:23:48 INFO system.fedora40 stdout: checking for glob.h... yes 2024-09-18 15:23:48 INFO system.fedora40 stdout: checking for fnmatch.h... yes 2024-09-18 15:23:49 INFO system.fedora40 stdout: checking for wordexp.h... yes 2024-09-18 15:23:49 INFO system.fedora40 stdout: checking for execinfo.h... yes 2024-09-18 15:23:49 INFO system.fedora40 stdout: checking for mallinfo... yes 2024-09-18 15:23:49 INFO system.fedora40 stdout: checking for backtrace... yes 2024-09-18 15:23:49 INFO system.fedora40 stdout: checking for getrlimit... yes 2024-09-18 15:23:50 INFO system.fedora40 stdout: checking for feenableexcept... no 2024-09-18 15:23:50 INFO system.fedora40 stdout: checking for fenv_t.__control... no 2024-09-18 15:23:50 INFO system.fedora40 stdout: checking for fenv_t.__mxcsr... yes 2024-09-18 15:23:50 INFO system.fedora40 stdout: checking C preprocessor flags for Fortran calling convention cfortran.h... -DgFortran (probed) 2024-09-18 15:23:51 INFO system.fedora40 stdout: checking if C externals constructed with cfortran.h work... yes 2024-09-18 15:23:51 INFO system.fedora40 stdout: checking how to run the C preprocessor... cpp 2024-09-18 15:23:51 INFO system.fedora40 stdout: checking for gcc options needed to detect all undeclared functions... none needed 2024-09-18 15:23:51 INFO system.fedora40 stdout: checking whether gcc is Clang... no 2024-09-18 15:23:51 INFO system.fedora40 stdout: checking whether pthreads work with "-pthread" and "-lpthread"... yes 2024-09-18 15:23:51 INFO system.fedora40 stdout: checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE 2024-09-18 15:23:51 INFO system.fedora40 stdout: checking whether more special flags are required for pthreads... no 2024-09-18 15:23:52 INFO system.fedora40 stdout: checking for PTHREAD_PRIO_INHERIT... yes 2024-09-18 15:23:52 INFO system.fedora40 stdout: CC:gcc CFLAGS:-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -pthread LIBS:-lpthread 2024-09-18 15:23:52 INFO system.fedora40 stdout: checking for szlib library... suppressed 2024-09-18 15:23:52 INFO system.fedora40 stdout: checking for hdf5.h... yes 2024-09-18 15:23:52 INFO system.fedora40 stdout: checking for library containing H5Fopen... -lhdf5 2024-09-18 15:23:52 INFO system.fedora40 stdout: checking for library containing H5DSis_scale... -lhdf5_hl 2024-09-18 15:23:53 INFO system.fedora40 stdout: checking for netcdf.h... yes 2024-09-18 15:23:53 INFO system.fedora40 stdout: checking for netcdf_meta.h... yes 2024-09-18 15:23:53 INFO system.fedora40 stdout: checking for library containing nc_open... -lnetcdf 2024-09-18 15:23:53 INFO system.fedora40 stdout: checking for nc-config... nc-config 2024-09-18 15:23:53 INFO system.fedora40 stdout: checking netcdf's OpenDAP support... yes 2024-09-18 15:23:53 INFO system.fedora40 stdout: checking netcdf's nc2 support... yes 2024-09-18 15:23:53 INFO system.fedora40 stdout: checking netcdf's nc4 support... yes 2024-09-18 15:23:53 INFO system.fedora40 stdout: checking netcdf's nc4/hdf5 support... yes 2024-09-18 15:23:54 INFO system.fedora40 stdout: checking for library containing H5TS_mutex_lock... no 2024-09-18 15:23:54 INFO system.fedora40 stdout: checking for library containing H5dont_atexit... none required 2024-09-18 15:23:54 INFO system.fedora40 stdout: checking for the UDUNITS2 library... suppressed 2024-09-18 15:23:54 INFO system.fedora40 stdout: checking for uuid/uuid.h extra include path... not found 2024-09-18 15:23:54 INFO system.fedora40 stdout: checking for uuid.h extra include path... not found 2024-09-18 15:23:54 INFO system.fedora40 stdout: checking for uuid.h extra include path... not found 2024-09-18 15:23:54 INFO system.fedora40 stdout: checking for the CMOR library... suppressed 2024-09-18 15:23:54 INFO system.fedora40 stdout: checking for the ECCODES library... suppressed 2024-09-18 15:23:54 INFO system.fedora40 stdout: checking for the GRIB_API library... suppressed 2024-09-18 15:23:54 INFO system.fedora40 stdout: checking for GRIB support... yes 2024-09-18 15:23:54 INFO system.fedora40 stdout: checking for CGRIBEX support... yes 2024-09-18 15:23:54 INFO system.fedora40 stdout: checking for SERVICE support... yes 2024-09-18 15:23:54 INFO system.fedora40 stdout: checking for EXTRA support... yes 2024-09-18 15:23:54 INFO system.fedora40 stdout: checking for IEG support... yes 2024-09-18 15:23:54 INFO system.fedora40 stdout: checking for FFTW3 support... checking for the PROJ library... suppressed 2024-09-18 15:23:54 INFO system.fedora40 stdout: checking for the CURL library... suppressed 2024-09-18 15:23:54 INFO system.fedora40 stdout: checking for MAGICS library... suppressed 2024-09-18 15:23:54 INFO system.fedora40 stdout: checking for XML2 library... suppressed 2024-09-18 15:23:54 INFO system.fedora40 stdout: checking for build a separate CDI library and link CDO to it... no 2024-09-18 15:23:54 INFO system.fedora40 stdout: checking for building an additional static CDO binary... no 2024-09-18 15:23:54 INFO system.fedora40 stdout: checking for HIRLAM extensions... no 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking for pthread_join using gcc -pthread -lpthread... yes 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking whether gcc is Clang... (cached) no 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking for joinable pthread attribute... (cached) PTHREAD_CREATE_JOINABLE 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking whether more special flags are required for pthreads... (cached) no 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking for PTHREAD_PRIO_INHERIT... (cached) yes 2024-09-18 15:23:55 INFO system.fedora40 stdout: CC:gcc CFLAGS:-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -pthread -pthread LIBS:-lpthread -lnetcdf -lhdf5_hl -lhdf5 -lpthread 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking for fdb5 library... suppressed 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking for szlib library... suppressed 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking for netcdf.h... (cached) yes 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking for library containing nc_open... (cached) -lnetcdf 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking for nc-config... (cached) nc-config 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking netcdf's OpenDAP support... yes 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking netcdf's Zarr support... yes 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking netcdf's nc2 support... yes 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking netcdf's nc4 support... yes 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking netcdf's nc4/hdf5 support... yes 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking netcdf's nc4/szlib support... yes 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking for library containing nc_def_var_szip... none required 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking for library containing H5get_libversion... none required 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking for the ECCODES library... suppressed 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking for the GRIB_API library... suppressed 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking for GRIB support... yes 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking for ACROSS support... yes 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking for CGRIBEX support... yes 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking for SERVICE support... yes 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking for EXTRA support... yes 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking for IEG support... yes 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking for building an additional static CDI binary... no 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking for HIRLAM extensions... no 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking for gawk... (cached) gawk 2024-09-18 15:23:55 INFO system.fedora40 stdout: checking that generated files are newer than configure... done 2024-09-18 15:23:55 INFO system.fedora40 stdout: === configuring in libcdi (/root/rpmbuild/BUILD/cdo-2.2.0/libcdi) 2024-09-18 15:23:55 INFO system.fedora40 stdout: configure: running /bin/sh ./configure '--prefix=/usr' --disable-option-checking '--build=x86_64-redhat-linux' '--host=x86_64-redhat-linux' '--program-prefix=' '--disable-dependency-tracking' '--exec-prefix=/usr' '--bindir=/usr/bin' '--sbindir=/usr/sbin' '--sysconfdir=/etc' '--datadir=/usr/share' '--includedir=/usr/include' '--libdir=/usr/lib64' '--libexecdir=/usr/libexec' '--localstatedir=/var' '--runstatedir=/run' '--sharedstatedir=/var/lib' '--mandir=/usr/share/man' '--infodir=/usr/share/info' '--with-netcdf' '--with-hdf5' 'build_alias=x86_64-redhat-linux' 'host_alias=x86_64-redhat-linux' 'CC=gcc' 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' 'LDFLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' 'LT_SYS_LIBRARY_PATH=/usr/lib64:' 'CXX=g++' 'CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' 'FFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' 'CPPFLAGS=-DCDI_SIZE_TYPE=size_t' '--srcdir=.' --cache-file=/dev/null 2024-09-18 15:23:56 INFO system.fedora40 stdout: checking build system type... x86_64-redhat-linux-gnu 2024-09-18 15:23:56 INFO system.fedora40 stdout: checking host system type... x86_64-redhat-linux-gnu 2024-09-18 15:23:56 INFO system.fedora40 stdout: checking for a BSD-compatible install... /usr/bin/install -c 2024-09-18 15:23:56 INFO system.fedora40 stdout: checking whether build environment is sane... yes 2024-09-18 15:23:56 INFO system.fedora40 stdout: checking for a race-free mkdir -p... /usr/bin/mkdir -p 2024-09-18 15:23:56 INFO system.fedora40 stdout: checking for gawk... gawk 2024-09-18 15:23:56 INFO system.fedora40 stdout: checking whether make sets $(MAKE)... yes 2024-09-18 15:23:56 INFO system.fedora40 stdout: checking whether make supports nested variables... yes 2024-09-18 15:23:56 INFO system.fedora40 stdout: checking whether to enable maintainer-specific portions of Makefiles... yes 2024-09-18 15:23:56 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-gcc... gcc 2024-09-18 15:23:56 INFO system.fedora40 stdout: checking whether the C compiler works... yes 2024-09-18 15:23:56 INFO system.fedora40 stdout: checking for C compiler default output file name... a.out 2024-09-18 15:23:56 INFO system.fedora40 stdout: checking for suffix of executables... 2024-09-18 15:23:56 INFO system.fedora40 stdout: checking whether we are cross compiling... no 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking for suffix of object files... o 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking whether the compiler supports GNU C... yes 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking whether gcc accepts -g... yes 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking for gcc option to enable C11 features... none needed 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking whether gcc understands -c and -o together... yes 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking whether make supports the include directive... yes (GNU style) 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking dependency style of gcc... none 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking For conformance to POSIX.1-2001.... yes 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking for C/C++ restrict keyword... __restrict__ 2024-09-18 15:23:57 INFO system.fedora40 stdout: configure: setting up libtool 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking how to print strings... printf 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking for a sed that does not truncate output... /usr/bin/sed 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking for grep that handles long lines and -e... /usr/bin/grep 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking for egrep... /usr/bin/grep -E 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking for fgrep... /usr/bin/grep -F 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking for ld used by gcc... /usr/bin/ld 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking if the linker (/usr/bin/ld) is GNU ld... yes 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking the name lister (/usr/bin/nm -B) interface... BSD nm 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking whether ln -s works... yes 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking the maximum length of command line arguments... 1572864 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking how to convert x86_64-redhat-linux-gnu file names to x86_64-redhat-linux-gnu format... func_convert_file_noop 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking how to convert x86_64-redhat-linux-gnu file names to toolchain format... func_convert_file_noop 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking for /usr/bin/ld option to reload object files... -r 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-file... no 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking for file... file 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-objdump... no 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking for objdump... objdump 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking how to recognize dependent libraries... pass_all 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-dlltool... no 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking for dlltool... no 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking how to associate runtime and link libraries... printf %s\n 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-ar... no 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking for ar... ar 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking for archiver @FILE support... @ 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-strip... no 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking for strip... strip 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-ranlib... no 2024-09-18 15:23:57 INFO system.fedora40 stdout: checking for ranlib... ranlib 2024-09-18 15:23:57 INFO system.fedora40 stderr: ./configure: line 10763: -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p': No such file or directory 2024-09-18 15:23:58 INFO system.fedora40 stdout: checking command to parse /usr/bin/nm -B output from gcc object... ok 2024-09-18 15:23:58 INFO system.fedora40 stdout: checking for sysroot... no 2024-09-18 15:23:58 INFO system.fedora40 stdout: checking for a working dd... /usr/bin/dd 2024-09-18 15:23:58 INFO system.fedora40 stdout: checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 2024-09-18 15:23:58 INFO system.fedora40 stdout: checking for x86_64-redhat-linux-mt... no 2024-09-18 15:23:58 INFO system.fedora40 stdout: checking for mt... no 2024-09-18 15:23:58 INFO system.fedora40 stdout: checking if : is a manifest tool... no 2024-09-18 15:23:58 INFO system.fedora40 stdout: checking for stdio.h... yes 2024-09-18 15:23:58 INFO system.fedora40 stdout: checking for stdlib.h... yes 2024-09-18 15:23:58 INFO system.fedora40 stdout: checking for string.h... yes 2024-09-18 15:23:58 INFO system.fedora40 stdout: checking for inttypes.h... yes 2024-09-18 15:23:58 INFO system.fedora40 stdout: checking for stdint.h... yes 2024-09-18 15:23:58 INFO system.fedora40 stdout: checking for strings.h... yes 2024-09-18 15:23:58 INFO system.fedora40 stdout: checking for sys/stat.h... yes 2024-09-18 15:23:58 INFO system.fedora40 stdout: checking for sys/types.h... yes 2024-09-18 15:23:58 INFO system.fedora40 stdout: checking for unistd.h... yes 2024-09-18 15:23:59 INFO system.fedora40 stdout: checking for sys/param.h... yes 2024-09-18 15:23:59 INFO system.fedora40 stdout: checking for dlfcn.h... yes 2024-09-18 15:23:59 INFO system.fedora40 stdout: checking any compiler has problems building shared objects... no 2024-09-18 15:23:59 INFO system.fedora40 stdout: checking for objdir... .libs 2024-09-18 15:23:59 INFO system.fedora40 stdout: checking if gcc supports -fno-rtti -fno-exceptions... no 2024-09-18 15:23:59 INFO system.fedora40 stdout: checking for gcc option to produce PIC... -fPIC -DPIC 2024-09-18 15:23:59 INFO system.fedora40 stdout: checking if gcc PIC flag -fPIC -DPIC works... yes 2024-09-18 15:23:59 INFO system.fedora40 stdout: checking if gcc static flag -static works... no 2024-09-18 15:23:59 INFO system.fedora40 stdout: checking if gcc supports -c -o file.o... yes 2024-09-18 15:23:59 INFO system.fedora40 stdout: checking if gcc supports -c -o file.o... (cached) yes 2024-09-18 15:23:59 INFO system.fedora40 stdout: checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes 2024-09-18 15:23:59 INFO system.fedora40 stdout: checking whether -lc should be explicitly linked in... no 2024-09-18 15:24:00 INFO system.fedora40 stdout: checking dynamic linker characteristics... GNU/Linux ld.so 2024-09-18 15:24:00 INFO system.fedora40 stdout: checking how to hardcode library paths into programs... immediate 2024-09-18 15:24:00 INFO system.fedora40 stdout: checking whether stripping libraries is possible... yes 2024-09-18 15:24:00 INFO system.fedora40 stdout: checking if libtool supports shared libraries... yes 2024-09-18 15:24:00 INFO system.fedora40 stdout: checking whether to build shared libraries... yes 2024-09-18 15:24:00 INFO system.fedora40 stdout: checking whether to build static libraries... yes 2024-09-18 15:24:00 INFO system.fedora40 stdout: checking whether this is the NAG Fortran compiler... no 2024-09-18 15:24:00 INFO system.fedora40 stdout: configure: creating ./config.lt 2024-09-18 15:24:01 INFO system.fedora40 stdout: config.lt: creating libtool 2024-09-18 15:24:02 INFO system.fedora40 stdout: checking whether libtool can link C programs... yes 2024-09-18 15:24:02 INFO system.fedora40 stdout: checking whether byte ordering is bigendian... no 2024-09-18 15:24:02 INFO system.fedora40 stdout: checking for special C compiler options needed for large files... no 2024-09-18 15:24:03 INFO system.fedora40 stdout: checking for _FILE_OFFSET_BITS value needed for large files... no 2024-09-18 15:24:03 INFO system.fedora40 stdout: checking for getpagesize... yes 2024-09-18 15:24:04 INFO system.fedora40 stdout: checking for working mmap... yes 2024-09-18 15:24:04 INFO system.fedora40 stdout: checking for struct stat.st_blksize... yes 2024-09-18 15:24:04 INFO system.fedora40 stdout: checking for malloc.h... yes 2024-09-18 15:24:04 INFO system.fedora40 stdout: checking for unistd.h... (cached) yes 2024-09-18 15:24:05 INFO system.fedora40 stdout: checking for sys/time.h... yes 2024-09-18 15:24:05 INFO system.fedora40 stdout: checking for execinfo.h... yes 2024-09-18 15:24:06 INFO system.fedora40 stdout: checking size parameter type for backtrace()... int 2024-09-18 15:24:06 INFO system.fedora40 stdout: checking for library containing backtrace... none required 2024-09-18 15:24:06 INFO system.fedora40 stdout: checking for mallinfo... yes 2024-09-18 15:24:07 INFO system.fedora40 stdout: checking for pwrite... yes 2024-09-18 15:24:07 INFO system.fedora40 stdout: checking for getline... yes 2024-09-18 15:24:08 INFO system.fedora40 stdout: checking for gcc options needed to detect all undeclared functions... none needed 2024-09-18 15:24:08 INFO system.fedora40 stdout: checking for uuid/uuid.h extra include path... not found 2024-09-18 15:24:08 INFO system.fedora40 stdout: checking for uuid.h extra include path... not found 2024-09-18 15:24:08 INFO system.fedora40 stdout: checking for uuid.h extra include path... not found 2024-09-18 15:24:09 INFO system.fedora40 stdout: checking whether isnan is declared... yes 2024-09-18 15:24:09 INFO system.fedora40 stdout: checking whether _SC_LARGE_PAGESIZE is declared... no 2024-09-18 15:24:09 INFO system.fedora40 stdout: checking whether PAGESIZE is declared... no 2024-09-18 15:24:09 INFO system.fedora40 stdout: checking whether PAGE_SIZE is declared... no 2024-09-18 15:24:09 INFO system.fedora40 stdout: checking whether _SC_PAGE_SIZE is declared... yes 2024-09-18 15:24:10 INFO system.fedora40 stdout: checking whether _SC_PAGESIZE is declared... yes 2024-09-18 15:24:10 INFO system.fedora40 stdout: checking whether _PC_REC_XFER_ALIGN is declared... yes 2024-09-18 15:24:10 INFO system.fedora40 stdout: checking whether POSIX_REC_XFER_ALIGN is declared... no 2024-09-18 15:24:11 INFO system.fedora40 stdout: checking for library containing floor... -lm 2024-09-18 15:24:12 INFO system.fedora40 stdout: checking whether __builtin_ctz is declared... yes 2024-09-18 15:24:12 INFO system.fedora40 stdout: checking how to run the C preprocessor... gcc -E 2024-09-18 15:24:12 INFO system.fedora40 stdout: checking whether gcc is Clang... no 2024-09-18 15:24:12 INFO system.fedora40 stdout: checking whether pthreads work with "-pthread" and "-lpthread"... yes 2024-09-18 15:24:13 INFO system.fedora40 stdout: checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE 2024-09-18 15:24:13 INFO system.fedora40 stdout: checking whether more special flags are required for pthreads... no 2024-09-18 15:24:13 INFO system.fedora40 stdout: checking for PTHREAD_PRIO_INHERIT... yes 2024-09-18 15:24:13 INFO system.fedora40 stdout: CC:gcc CFLAGS:-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -pthread LIBS:-lpthread -lm 2024-09-18 15:24:13 INFO system.fedora40 stdout: checking for fdb5 library... suppressed 2024-09-18 15:24:13 INFO system.fedora40 stdout: checking for szlib library... suppressed 2024-09-18 15:24:13 INFO system.fedora40 stdout: checking for netcdf.h... yes 2024-09-18 15:24:14 INFO system.fedora40 stdout: checking for library containing nc_open... -lnetcdf 2024-09-18 15:24:14 INFO system.fedora40 stdout: checking for nc-config... nc-config 2024-09-18 15:24:14 INFO system.fedora40 stdout: checking netcdf's OpenDAP support... yes 2024-09-18 15:24:14 INFO system.fedora40 stdout: checking netcdf's Zarr support... yes 2024-09-18 15:24:14 INFO system.fedora40 stdout: checking netcdf's nc2 support... yes 2024-09-18 15:24:14 INFO system.fedora40 stdout: checking netcdf's nc4 support... yes 2024-09-18 15:24:14 INFO system.fedora40 stdout: checking netcdf's nc4/hdf5 support... yes 2024-09-18 15:24:14 INFO system.fedora40 stdout: checking netcdf's nc4/szlib support... yes 2024-09-18 15:24:15 INFO system.fedora40 stdout: checking for library containing nc_def_var_szip... none required 2024-09-18 15:24:16 INFO system.fedora40 stdout: checking for library containing H5get_libversion... -lnetcdf 2024-09-18 15:24:16 INFO system.fedora40 stdout: checking for the ECCODES library... suppressed 2024-09-18 15:24:16 INFO system.fedora40 stdout: checking for the GRIB_API library... suppressed 2024-09-18 15:24:16 INFO system.fedora40 stdout: checking for GRIB support... yes 2024-09-18 15:24:16 INFO system.fedora40 stdout: checking for ACROSS support... yes 2024-09-18 15:24:16 INFO system.fedora40 stdout: checking for CGRIBEX support... yes 2024-09-18 15:24:16 INFO system.fedora40 stdout: checking for SERVICE support... yes 2024-09-18 15:24:16 INFO system.fedora40 stdout: checking for EXTRA support... yes 2024-09-18 15:24:16 INFO system.fedora40 stdout: checking for IEG support... yes 2024-09-18 15:24:16 INFO system.fedora40 stdout: checking for building an additional static CDI binary... no 2024-09-18 15:24:16 INFO system.fedora40 stdout: checking for HIRLAM extensions... no 2024-09-18 15:24:16 INFO system.fedora40 stdout: checking for grib_get_length... no 2024-09-18 15:24:16 INFO system.fedora40 stdout: checking that generated files are newer than configure... done 2024-09-18 15:24:16 INFO system.fedora40 stdout: configure: creating ./config.status 2024-09-18 15:24:19 INFO system.fedora40 stdout: config.status: creating Makefile 2024-09-18 15:24:19 INFO system.fedora40 stdout: config.status: creating app/Makefile 2024-09-18 15:24:19 INFO system.fedora40 stdout: config.status: creating cdi.settings 2024-09-18 15:24:19 INFO system.fedora40 stdout: config.status: creating examples/Makefile 2024-09-18 15:24:19 INFO system.fedora40 stdout: config.status: creating examples/pio/Makefile 2024-09-18 15:24:19 INFO system.fedora40 stdout: config.status: creating interfaces/Makefile 2024-09-18 15:24:19 INFO system.fedora40 stdout: config.status: creating src/Makefile 2024-09-18 15:24:19 INFO system.fedora40 stdout: config.status: creating src/cmake/cdi/cdi-config-version.cmake 2024-09-18 15:24:19 INFO system.fedora40 stdout: config.status: creating src/cmake/cdi/cdi-config.cmake 2024-09-18 15:24:19 INFO system.fedora40 stdout: config.status: creating src/pkgconfig/cdi.pc 2024-09-18 15:24:19 INFO system.fedora40 stdout: config.status: creating src/pkgconfig/cdi_f2003.pc 2024-09-18 15:24:19 INFO system.fedora40 stdout: config.status: creating src/pkgconfig/cdipio.pc 2024-09-18 15:24:19 INFO system.fedora40 stdout: config.status: creating tests/Makefile 2024-09-18 15:24:19 INFO system.fedora40 stdout: config.status: creating tests/test_cksum_base 2024-09-18 15:24:19 INFO system.fedora40 stdout: config.status: creating interfaces/test_cpp_nc.run 2024-09-18 15:24:19 INFO system.fedora40 stdout: config.status: creating interfaces/test_python_grb.run 2024-09-18 15:24:19 INFO system.fedora40 stdout: config.status: creating interfaces/test_python_nc.run 2024-09-18 15:24:19 INFO system.fedora40 stdout: config.status: creating interfaces/test_ruby_grb.run 2024-09-18 15:24:19 INFO system.fedora40 stdout: config.status: creating interfaces/test_ruby_nc.run 2024-09-18 15:24:19 INFO system.fedora40 stdout: config.status: creating tables/gen_tableheaderfile 2024-09-18 15:24:19 INFO system.fedora40 stdout: config.status: creating tests/pio_cksum_asynch.run 2024-09-18 15:24:19 INFO system.fedora40 stdout: config.status: creating tests/pio_cksum_fpguard.run 2024-09-18 15:24:19 INFO system.fedora40 stdout: config.status: creating tests/pio_cksum_grb2.run 2024-09-18 15:24:20 INFO system.fedora40 stdout: config.status: creating tests/pio_cksum_mpi_fw_at_all.run 2024-09-18 15:24:20 INFO system.fedora40 stdout: config.status: creating tests/pio_cksum_mpi_fw_at_reblock.run 2024-09-18 15:24:20 INFO system.fedora40 stdout: config.status: creating tests/pio_cksum_mpi_fw_ordered.run 2024-09-18 15:24:20 INFO system.fedora40 stdout: config.status: creating tests/pio_cksum_mpinonb.run 2024-09-18 15:24:20 INFO system.fedora40 stdout: config.status: creating tests/pio_cksum_nc.run 2024-09-18 15:24:20 INFO system.fedora40 stdout: config.status: creating tests/pio_cksum_nc2.run 2024-09-18 15:24:20 INFO system.fedora40 stdout: config.status: creating tests/pio_cksum_nc4.run 2024-09-18 15:24:20 INFO system.fedora40 stdout: config.status: creating tests/pio_cksum_writer.run 2024-09-18 15:24:20 INFO system.fedora40 stdout: config.status: creating tests/pio_write.parallel.run 2024-09-18 15:24:20 INFO system.fedora40 stdout: config.status: creating tests/pio_write.run 2024-09-18 15:24:20 INFO system.fedora40 stdout: config.status: creating tests/pio_write_deco2d.parallel.run 2024-09-18 15:24:20 INFO system.fedora40 stdout: config.status: creating tests/pio_write_deco2d.run 2024-09-18 15:24:20 INFO system.fedora40 stdout: config.status: creating tests/pio_write_dist_array.run 2024-09-18 15:24:20 INFO system.fedora40 stdout: config.status: creating tests/test_byteswap.run 2024-09-18 15:24:20 INFO system.fedora40 stdout: config.status: creating tests/test_cdf_const.run 2024-09-18 15:24:20 INFO system.fedora40 stdout: config.status: creating tests/test_cdf_transformation.run 2024-09-18 15:24:20 INFO system.fedora40 stdout: config.status: creating tests/test_cksum_ext.run 2024-09-18 15:24:20 INFO system.fedora40 stdout: config.status: creating tests/test_cksum_grb.run 2024-09-18 15:24:20 INFO system.fedora40 stdout: config.status: creating tests/test_cksum_grb2.run 2024-09-18 15:24:20 INFO system.fedora40 stdout: config.status: creating tests/test_cksum_ieg.run 2024-09-18 15:24:20 INFO system.fedora40 stdout: config.status: creating tests/test_cksum_nc.run 2024-09-18 15:24:20 INFO system.fedora40 stdout: config.status: creating tests/test_cksum_nc2.run 2024-09-18 15:24:20 INFO system.fedora40 stdout: config.status: creating tests/test_cksum_nc4.run 2024-09-18 15:24:20 INFO system.fedora40 stdout: config.status: creating tests/test_cksum_nc_chunk.run 2024-09-18 15:24:21 INFO system.fedora40 stdout: config.status: creating tests/test_cksum_srv.run 2024-09-18 15:24:21 INFO system.fedora40 stdout: config.status: creating tests/test_f2003.run 2024-09-18 15:24:21 INFO system.fedora40 stdout: config.status: creating tests/test_grib.run 2024-09-18 15:24:21 INFO system.fedora40 stdout: config.status: creating tests/test_resource_copy.parallel.run 2024-09-18 15:24:21 INFO system.fedora40 stdout: config.status: creating tests/test_resource_copy.run 2024-09-18 15:24:21 INFO system.fedora40 stdout: config.status: creating tests/test_table.run 2024-09-18 15:24:21 INFO system.fedora40 stdout: config.status: creating src/config.h 2024-09-18 15:24:21 INFO system.fedora40 stdout: config.status: executing depfiles commands 2024-09-18 15:24:21 INFO system.fedora40 stdout: config.status: executing libtool commands 2024-09-18 15:24:21 INFO system.fedora40 stdout: configure: CDI is configured with the following options: 2024-09-18 15:24:21 INFO system.fedora40 stdout: { 2024-09-18 15:24:21 INFO system.fedora40 stdout: "build" : { 2024-09-18 15:24:21 INFO system.fedora40 stdout: "tools" : { 2024-09-18 15:24:21 INFO system.fedora40 stdout: "CC" : "gcc", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "CPP" : "gcc -E", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "CPPFLAGS" : "-DCDI_SIZE_TYPE=size_t ", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "CFLAGS" : "-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -pthread", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "LDFLAGS" : "-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "LIBS" : "-lnetcdf -lnetcdf -lpthread -lm ", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "FC" : "no", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "F77" : "no", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "FCFLAGS" : "-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "LD" : "/usr/bin/ld -m elf_x86_64", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "NM" : "/usr/bin/nm -B", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "AR" : "ar", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "DLLTOOL" : "false", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "OBJDUMP" : "objdump", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "STRIP" : "strip", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "RANLIB" : "ranlib", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "INSTALL" : "/usr/bin/install -c" 2024-09-18 15:24:21 INFO system.fedora40 stdout: }, 2024-09-18 15:24:21 INFO system.fedora40 stdout: "libraries" : { 2024-09-18 15:24:21 INFO system.fedora40 stdout: "threads" : { 2024-09-18 15:24:21 INFO system.fedora40 stdout: "lib" : "", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "include" : "" 2024-09-18 15:24:21 INFO system.fedora40 stdout: }, 2024-09-18 15:24:21 INFO system.fedora40 stdout: "mpi" : { 2024-09-18 15:24:21 INFO system.fedora40 stdout: "libs" : "", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "cflags" : "", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "fclibs" : "", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "fcflags" : "" 2024-09-18 15:24:21 INFO system.fedora40 stdout: }, 2024-09-18 15:24:21 INFO system.fedora40 stdout: "fdb5" : { 2024-09-18 15:24:21 INFO system.fedora40 stdout: "lib" : "", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "include" : "" 2024-09-18 15:24:21 INFO system.fedora40 stdout: }, 2024-09-18 15:24:21 INFO system.fedora40 stdout: "szlib" : { 2024-09-18 15:24:21 INFO system.fedora40 stdout: "lib" : "", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "include" : "" 2024-09-18 15:24:21 INFO system.fedora40 stdout: }, 2024-09-18 15:24:21 INFO system.fedora40 stdout: "netcdf" : { 2024-09-18 15:24:21 INFO system.fedora40 stdout: "lib" : " -lnetcdf", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "include" : "" 2024-09-18 15:24:21 INFO system.fedora40 stdout: }, 2024-09-18 15:24:21 INFO system.fedora40 stdout: "grib_api" : { 2024-09-18 15:24:21 INFO system.fedora40 stdout: "lib" : "", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "include" : "" 2024-09-18 15:24:21 INFO system.fedora40 stdout: }, 2024-09-18 15:24:21 INFO system.fedora40 stdout: "eccodes" : { 2024-09-18 15:24:21 INFO system.fedora40 stdout: "lib" : "", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "include" : "" 2024-09-18 15:24:21 INFO system.fedora40 stdout: } 2024-09-18 15:24:21 INFO system.fedora40 stdout: }, 2024-09-18 15:24:21 INFO system.fedora40 stdout: "platform" : { 2024-09-18 15:24:21 INFO system.fedora40 stdout: "SYSTEM_TYPE" : "x86_64-redhat-linux-gnu" 2024-09-18 15:24:21 INFO system.fedora40 stdout: } 2024-09-18 15:24:21 INFO system.fedora40 stdout: }, 2024-09-18 15:24:21 INFO system.fedora40 stdout: "features" : { 2024-09-18 15:24:21 INFO system.fedora40 stdout: "enable_cdi_lib" : false, 2024-09-18 15:24:21 INFO system.fedora40 stdout: "grib" : "yes", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "cgribex" : "yes", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "service" : "yes", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "extra" : "yes", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "ieg" : "yes", 2024-09-18 15:24:21 INFO system.fedora40 stdout: "enable_mpi" : false, 2024-09-18 15:24:21 INFO system.fedora40 stdout: "parallel_nc4" : 0, 2024-09-18 15:24:21 INFO system.fedora40 stdout: "enable_python" : false, 2024-09-18 15:24:21 INFO system.fedora40 stdout: "enable_ruby" : false 2024-09-18 15:24:21 INFO system.fedora40 stdout: "across" : "yes", 2024-09-18 15:24:21 INFO system.fedora40 stdout: } 2024-09-18 15:24:21 INFO system.fedora40 stdout: } 2024-09-18 15:24:21 INFO system.fedora40 stdout: configure: 2024-09-18 15:24:21 INFO system.fedora40 stdout: 2024-09-18 15:24:21 INFO system.fedora40 stdout: Configuration completed. 2024-09-18 15:24:21 INFO system.fedora40 stdout: 2024-09-18 15:24:21 INFO system.fedora40 stdout: You can now run 'make' to compile the CDI package and 'make install' to install it afterwards. 2024-09-18 15:24:21 INFO system.fedora40 stdout: 2024-09-18 15:24:21 INFO system.fedora40 stdout: configure: creating ./config.status 2024-09-18 15:24:23 INFO system.fedora40 stdout: config.status: creating test/cdoTestFunctions.test 2024-09-18 15:24:23 INFO system.fedora40 stdout: config.status: creating test/pytest/cdoTest.py 2024-09-18 15:24:23 INFO system.fedora40 stdout: config.status: creating test/pytest/Adisit.py.test 2024-09-18 15:24:23 INFO system.fedora40 stdout: config.status: creating test/pytest/Afterburner.py.test 2024-09-18 15:24:23 INFO system.fedora40 stdout: config.status: creating test/pytest/Arith.py.test 2024-09-18 15:24:23 INFO system.fedora40 stdout: config.status: creating test/pytest/Arithc.py.test 2024-09-18 15:24:23 INFO system.fedora40 stdout: config.status: creating test/pytest/Arith_extra.py.test 2024-09-18 15:24:23 INFO system.fedora40 stdout: config.status: creating test/pytest/Cat.py.test 2024-09-18 15:24:23 INFO system.fedora40 stdout: config.status: creating test/pytest/Change.py.test 2024-09-18 15:24:23 INFO system.fedora40 stdout: config.status: creating test/pytest/CMOR.py.test 2024-09-18 15:24:23 INFO system.fedora40 stdout: config.status: creating test/pytest/Collgrid.py.test 2024-09-18 15:24:23 INFO system.fedora40 stdout: config.status: creating test/pytest/Comp.py.test 2024-09-18 15:24:23 INFO system.fedora40 stdout: config.status: creating test/pytest/Compc.py.test 2024-09-18 15:24:23 INFO system.fedora40 stdout: config.status: creating test/pytest/Copy_netcdf.py.test 2024-09-18 15:24:24 INFO system.fedora40 stdout: config.status: creating test/pytest/Dayarith.py.test 2024-09-18 15:24:24 INFO system.fedora40 stdout: config.status: creating test/pytest/Detrend.py.test 2024-09-18 15:24:24 INFO system.fedora40 stdout: config.status: creating test/pytest/Eca.py.test 2024-09-18 15:24:24 INFO system.fedora40 stdout: config.status: creating test/pytest/Enspctl.py.test 2024-09-18 15:24:24 INFO system.fedora40 stdout: config.status: creating test/pytest/Ensstat.py.test 2024-09-18 15:24:24 INFO system.fedora40 stdout: config.status: creating test/pytest/EOFcoeff.py.test 2024-09-18 15:24:24 INFO system.fedora40 stdout: config.status: creating test/pytest/EOF.py.test 2024-09-18 15:24:24 INFO system.fedora40 stdout: config.status: creating test/pytest/Etccdi.py.test 2024-09-18 15:24:24 INFO system.fedora40 stdout: config.status: creating test/pytest/Expr.py.test 2024-09-18 15:24:24 INFO system.fedora40 stdout: config.status: creating test/pytest/File.py.test 2024-09-18 15:24:24 INFO system.fedora40 stdout: config.status: creating test/pytest/Filter.py.test 2024-09-18 15:24:24 INFO system.fedora40 stdout: config.status: creating test/pytest/Fldpctl.py.test 2024-09-18 15:24:24 INFO system.fedora40 stdout: config.status: creating test/pytest/Fldstat2.py.test 2024-09-18 15:24:24 INFO system.fedora40 stdout: config.status: creating test/pytest/Fldstat.py.test 2024-09-18 15:24:24 INFO system.fedora40 stdout: config.status: creating test/pytest/Genweights.py.test 2024-09-18 15:24:24 INFO system.fedora40 stdout: config.status: creating test/pytest/Gradsdes.py.test 2024-09-18 15:24:24 INFO system.fedora40 stdout: config.status: creating test/pytest/Gridarea.py.test 2024-09-18 15:24:24 INFO system.fedora40 stdout: config.status: creating test/pytest/Gridboxstat.py.test 2024-09-18 15:24:24 INFO system.fedora40 stdout: config.status: creating test/pytest/Inttime.py.test 2024-09-18 15:24:24 INFO system.fedora40 stdout: config.status: creating test/pytest/Intyear.py.test 2024-09-18 15:24:24 INFO system.fedora40 stdout: config.status: creating test/pytest/Isosurface.py.test 2024-09-18 15:24:24 INFO system.fedora40 stdout: config.status: creating test/pytest/Maggraph.py.test 2024-09-18 15:24:24 INFO system.fedora40 stdout: config.status: creating test/pytest/Magplot.py.test 2024-09-18 15:24:25 INFO system.fedora40 stdout: config.status: creating test/pytest/Magvector.py.test 2024-09-18 15:24:25 INFO system.fedora40 stdout: config.status: creating test/pytest/MapReduce.py.test 2024-09-18 15:24:25 INFO system.fedora40 stdout: config.status: creating test/pytest/Maskregion.py.test 2024-09-18 15:24:25 INFO system.fedora40 stdout: config.status: creating test/pytest/Math.py.test 2024-09-18 15:24:25 INFO system.fedora40 stdout: config.status: creating test/pytest/Merge.py.test 2024-09-18 15:24:25 INFO system.fedora40 stdout: config.status: creating test/pytest/Mergetime.py.test 2024-09-18 15:24:25 INFO system.fedora40 stdout: config.status: creating test/pytest/Merstat.py.test 2024-09-18 15:24:25 INFO system.fedora40 stdout: config.status: creating test/pytest/Monarith.py.test 2024-09-18 15:24:25 INFO system.fedora40 stdout: config.status: creating test/pytest/Multiyearstat.py.test 2024-09-18 15:24:25 INFO system.fedora40 stdout: config.status: creating test/pytest/Ninfo.py.test 2024-09-18 15:24:25 INFO system.fedora40 stdout: config.status: creating test/pytest/Percentile.py.test 2024-09-18 15:24:25 INFO system.fedora40 stdout: config.status: creating test/pytest/Read_grib.py.test 2024-09-18 15:24:25 INFO system.fedora40 stdout: config.status: creating test/pytest/Read_netcdf.py.test 2024-09-18 15:24:25 INFO system.fedora40 stdout: config.status: creating test/pytest/Remap.py.test 2024-09-18 15:24:25 INFO system.fedora40 stdout: config.status: creating test/pytest/Remap_noweights.py.test 2024-09-18 15:24:25 INFO system.fedora40 stdout: config.status: creating test/pytest/Remap2.py.test 2024-09-18 15:24:25 INFO system.fedora40 stdout: config.status: creating test/pytest/Remap3.py.test 2024-09-18 15:24:25 INFO system.fedora40 stdout: config.status: creating test/pytest/Remap4.py.test 2024-09-18 15:24:25 INFO system.fedora40 stdout: config.status: creating test/pytest/Remap_global_5_grid.py.test 2024-09-18 15:24:25 INFO system.fedora40 stdout: config.status: creating test/pytest/Remap_healpix.py.test 2024-09-18 15:24:25 INFO system.fedora40 stdout: config.status: creating test/pytest/Remap_small.py.test 2024-09-18 15:24:25 INFO system.fedora40 stdout: config.status: creating test/pytest/Remap_extra.py.test 2024-09-18 15:24:25 INFO system.fedora40 stdout: config.status: creating test/pytest/Remap_extra_file.py.test 2024-09-18 15:24:25 INFO system.fedora40 stdout: config.status: creating test/pytest/Remap_extra_file2.py.test 2024-09-18 15:24:26 INFO system.fedora40 stdout: config.status: creating test/pytest/Remapeta.py.test 2024-09-18 15:24:26 INFO system.fedora40 stdout: config.status: creating test/pytest/Remapstat.py.test 2024-09-18 15:24:26 INFO system.fedora40 stdout: config.status: creating test/pytest/Runpctl.py.test 2024-09-18 15:24:26 INFO system.fedora40 stdout: config.status: creating test/pytest/Seasstat.py.test 2024-09-18 15:24:26 INFO system.fedora40 stdout: config.status: creating test/pytest/Runstat.py.test 2024-09-18 15:24:26 INFO system.fedora40 stdout: config.status: creating test/pytest/Select.py.test 2024-09-18 15:24:26 INFO system.fedora40 stdout: config.status: creating test/pytest/Selregion.py.test 2024-09-18 15:24:26 INFO system.fedora40 stdout: config.status: creating test/pytest/Setmiss.py.test 2024-09-18 15:24:26 INFO system.fedora40 stdout: config.status: creating test/pytest/Smooth.py.test 2024-09-18 15:24:26 INFO system.fedora40 stdout: config.status: creating test/pytest/Spectral.py.test 2024-09-18 15:24:26 INFO system.fedora40 stdout: config.status: creating test/pytest/threads.py.test 2024-09-18 15:24:26 INFO system.fedora40 stdout: config.status: creating test/pytest/Timpctl.py.test 2024-09-18 15:24:26 INFO system.fedora40 stdout: config.status: creating test/pytest/Timselpctl.py.test 2024-09-18 15:24:26 INFO system.fedora40 stdout: config.status: creating test/pytest/Timselstat.py.test 2024-09-18 15:24:26 INFO system.fedora40 stdout: config.status: creating test/pytest/Timstat2.py.test 2024-09-18 15:24:26 INFO system.fedora40 stdout: config.status: creating test/pytest/Timstat.py.test 2024-09-18 15:24:26 INFO system.fedora40 stdout: config.status: creating test/pytest/tsformat.py.test 2024-09-18 15:24:26 INFO system.fedora40 stdout: config.status: creating test/pytest/userInput.py.test 2024-09-18 15:24:26 INFO system.fedora40 stdout: config.status: creating test/pytest/Varsstat.py.test 2024-09-18 15:24:26 INFO system.fedora40 stdout: config.status: creating test/pytest/Vertint.py.test 2024-09-18 15:24:26 INFO system.fedora40 stdout: config.status: creating test/pytest/Vertstat.py.test 2024-09-18 15:24:26 INFO system.fedora40 stdout: config.status: creating test/pytest/wildcard.py.test 2024-09-18 15:24:26 INFO system.fedora40 stdout: config.status: creating test/pytest/cdoReturnValues.py.test 2024-09-18 15:24:27 INFO system.fedora40 stdout: config.status: creating test/pytest/Wind.py.test 2024-09-18 15:24:27 INFO system.fedora40 stdout: config.status: creating test/pytest/Ydayarith.py.test 2024-09-18 15:24:27 INFO system.fedora40 stdout: config.status: creating test/pytest/Ydrunpctl.py.test 2024-09-18 15:24:27 INFO system.fedora40 stdout: config.status: creating test/pytest/Ydrunstat.py.test 2024-09-18 15:24:27 INFO system.fedora40 stdout: config.status: creating test/pytest/Yeararith.py.test 2024-09-18 15:24:27 INFO system.fedora40 stdout: config.status: creating test/pytest/Yearmonstat.py.test 2024-09-18 15:24:27 INFO system.fedora40 stdout: config.status: creating test/pytest/Ymonarith.py.test 2024-09-18 15:24:27 INFO system.fedora40 stdout: config.status: creating test/pytest/Zonstat.py.test 2024-09-18 15:24:27 INFO system.fedora40 stdout: config.status: creating test/pytest/Vargen.py.test 2024-09-18 15:24:27 INFO system.fedora40 stdout: config.status: creating test/executeOnly/Splitsel.test 2024-09-18 15:24:27 INFO system.fedora40 stdout: config.status: creating contrib/Makefile 2024-09-18 15:24:27 INFO system.fedora40 stdout: config.status: creating cdo.spec 2024-09-18 15:24:27 INFO system.fedora40 stdout: config.status: creating cdo.settings 2024-09-18 15:24:27 INFO system.fedora40 stdout: config.status: creating Makefile 2024-09-18 15:24:27 INFO system.fedora40 stdout: config.status: creating src/lib/ncl/Makefile 2024-09-18 15:24:27 INFO system.fedora40 stdout: config.status: creating src/lib/yac/Makefile 2024-09-18 15:24:27 INFO system.fedora40 stdout: config.status: creating src/lib/gradsdes/Makefile 2024-09-18 15:24:27 INFO system.fedora40 stdout: config.status: creating src/lib/healpix/Makefile 2024-09-18 15:24:27 INFO system.fedora40 stdout: config.status: creating src/Makefile 2024-09-18 15:24:27 INFO system.fedora40 stdout: config.status: creating test/data/Makefile 2024-09-18 15:24:27 INFO system.fedora40 stdout: config.status: creating test/executeOnly/Makefile 2024-09-18 15:24:27 INFO system.fedora40 stdout: config.status: creating test/bandit_tests/Makefile 2024-09-18 15:24:27 INFO system.fedora40 stdout: config.status: creating test/pytest/Makefile 2024-09-18 15:24:27 INFO system.fedora40 stdout: config.status: creating src/config.h 2024-09-18 15:24:27 INFO system.fedora40 stdout: config.status: executing depfiles commands 2024-09-18 15:24:27 INFO system.fedora40 stdout: config.status: executing libtool commands 2024-09-18 15:24:27 INFO system.fedora40 stdout: configure: CDO is configured with the following options: 2024-09-18 15:24:27 INFO system.fedora40 stdout: { 2024-09-18 15:24:27 INFO system.fedora40 stdout: "build" : { 2024-09-18 15:24:27 INFO system.fedora40 stdout: "tools" : { 2024-09-18 15:24:27 INFO system.fedora40 stdout: "CXX" : "g++", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "CC" : "gcc", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "CPP" : "cpp", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "CPPFLAGS" : "-DgFortran -DCDI_SIZE_TYPE=size_t", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "CXXFLAGS" : "-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -pthread", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "CFLAGS" : "-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -pthread -pthread", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "F77" : "gfortran", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "FFLAGS" : "-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "LDFLAGS" : "-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "LIBS" : "-lnetcdf -lpthread -lnetcdf -lhdf5_hl -lhdf5 -lpthread ", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "FCFLAGS" : "@FCFLAGS@", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "INCLUDES" : "@INCLUDES@", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "LD" : "/usr/bin/ld -m elf_x86_64", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "NM" : "/usr/bin/nm -B", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "AR" : "ar", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "AS" : "as", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "DLLTOOL" : "false", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "OBJDUMP" : "objdump", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "STRIP" : "strip", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "RANLIB" : "ranlib", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "INSTALL" : "/usr/bin/install -c", 2024-09-18 15:24:27 INFO system.fedora40 stdout: }, 2024-09-18 15:24:27 INFO system.fedora40 stdout: "libraries" : { 2024-09-18 15:24:27 INFO system.fedora40 stdout: "threads" : { 2024-09-18 15:24:27 INFO system.fedora40 stdout: "lib" : "", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "include" : "" 2024-09-18 15:24:27 INFO system.fedora40 stdout: }, 2024-09-18 15:24:27 INFO system.fedora40 stdout: "szlib" : { 2024-09-18 15:24:27 INFO system.fedora40 stdout: "lib" : "", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "include" : "" 2024-09-18 15:24:27 INFO system.fedora40 stdout: }, 2024-09-18 15:24:27 INFO system.fedora40 stdout: "hdf5" : { 2024-09-18 15:24:27 INFO system.fedora40 stdout: "lib" : " -lhdf5", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "include" : "" 2024-09-18 15:24:27 INFO system.fedora40 stdout: }, 2024-09-18 15:24:27 INFO system.fedora40 stdout: "netcdf" : { 2024-09-18 15:24:27 INFO system.fedora40 stdout: "lib" : " -lnetcdf", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "include" : "" 2024-09-18 15:24:27 INFO system.fedora40 stdout: }, 2024-09-18 15:24:27 INFO system.fedora40 stdout: "udunits2" : { 2024-09-18 15:24:27 INFO system.fedora40 stdout: "lib" : "", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "include" : "" 2024-09-18 15:24:27 INFO system.fedora40 stdout: }, 2024-09-18 15:24:27 INFO system.fedora40 stdout: "proj" : { 2024-09-18 15:24:27 INFO system.fedora40 stdout: "lib" : "", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "include" : "" 2024-09-18 15:24:27 INFO system.fedora40 stdout: }, 2024-09-18 15:24:27 INFO system.fedora40 stdout: "magics" : { 2024-09-18 15:24:27 INFO system.fedora40 stdout: "lib" : "", 2024-09-18 15:24:27 INFO system.fedora40 stdout: "include" : "" 2024-09-18 15:24:27 INFO system.fedora40 stdout: } 2024-09-18 15:24:27 INFO system.fedora40 stdout: }, 2024-09-18 15:24:27 INFO system.fedora40 stdout: "platform" : { 2024-09-18 15:24:27 INFO system.fedora40 stdout: "SYSTEM_TYPE" : "x86_64-redhat-linux-gnu" 2024-09-18 15:24:27 INFO system.fedora40 stdout: }, 2024-09-18 15:24:27 INFO system.fedora40 stdout: }, 2024-09-18 15:24:27 INFO system.fedora40 stdout: "features" : { 2024-09-18 15:24:27 INFO system.fedora40 stdout: "enable_cdi_lib" : false, 2024-09-18 15:24:27 INFO system.fedora40 stdout: "enable_fortran" : true, 2024-09-18 15:24:27 INFO system.fedora40 stdout: "fortran_works" : "yes", 2024-09-18 15:24:27 INFO system.fedora40 stdout: } 2024-09-18 15:24:27 INFO system.fedora40 stdout: } 2024-09-18 15:24:27 INFO system.fedora40 stdout: configure: 2024-09-18 15:24:27 INFO system.fedora40 stdout: 2024-09-18 15:24:27 INFO system.fedora40 stdout: Configuration completed. 2024-09-18 15:24:27 INFO system.fedora40 stdout: 2024-09-18 15:24:27 INFO system.fedora40 stdout: You can now say 'make' to compile the CDO package and 'make install' to install it afterwards. 2024-09-18 15:24:27 INFO system.fedora40 stdout: 2024-09-18 15:24:28 INFO system.fedora40 stderr: + make 2024-09-18 15:24:28 INFO system.fedora40 stdout: Making all in libcdi 2024-09-18 15:24:28 INFO system.fedora40 stdout: make[1]: Entering directory '/root/rpmbuild/BUILD/cdo-2.2.0/libcdi' 2024-09-18 15:24:28 INFO system.fedora40 stdout: Making all in src 2024-09-18 15:24:28 INFO system.fedora40 stdout: make[2]: Entering directory '/root/rpmbuild/BUILD/cdo-2.2.0/libcdi/src' 2024-09-18 15:24:28 INFO system.fedora40 stdout: make all-am 2024-09-18 15:24:28 INFO system.fedora40 stdout: make[3]: Entering directory '/root/rpmbuild/BUILD/cdo-2.2.0/libcdi/src' 2024-09-18 15:24:28 INFO system.fedora40 stdout: /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DCDI_SIZE_TYPE=size_t -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -pthread -c -o async_worker.lo async_worker.c 2024-09-18 15:24:28 INFO system.fedora40 stdout: libtool: compile: gcc -DHAVE_CONFIG_H -I. -DCDI_SIZE_TYPE=size_t -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -pthread -c async_worker.c -fPIC -DPIC -o .libs/async_worker.o 2024-09-18 15:24:28 INFO system.fedora40 stdout: libtool: compile: gcc -DHAVE_CONFIG_H -I. -DCDI_SIZE_TYPE=size_t -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -pthread -c async_worker.c -fPIC -DPIC -o async_worker.o >/dev/null 2>&1 2024-09-18 15:24:28 INFO system.fedora40 stdout: /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DCDI_SIZE_TYPE=size_t -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -pthread -c -o basetime.lo basetime.c 2024-09-18 15:24:28 INFO system.fedora40 stdout: libtool: compile: gcc -DHAVE_CONFIG_H -I. -DCDI_SIZE_TYPE=size_t -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -pthread -c basetime.c -fPIC -DPIC -o .libs/basetime.o 2024-09-18 15:24:28 INFO system.fedora40 stdout: libtool: compile: gcc -DHAVE_CONFIG_H -I. -DCDI_SIZE_TYPE=size_t -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -pthread -c basetime.c -fPIC -DPIC -o basetime.o >/dev/null 2>&1 2024-09-18 15:24:28 INFO system.fedora40 stdout: /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DCDI_SIZE_TYPE=size_t -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -pthread -c -o binary.lo binary.c 2024-09-18 15:24:28 INFO system.fedora40 stdout: libtool: compile: gcc -DHAVE_CONFIG_H -I. -DCDI_SIZE_TYPE=size_t -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -pthread -c binary.c -fPIC -DPIC -o .libs/binary.o 2024-09-18 15:24:29 INFO system.fedora40 stdout: libtool: compile: gcc -DHAVE_CONFIG_H -I. -DCDI_SIZE_TYPE=size_t -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -pthread -c binary.c -fPIC -DPIC -o binary.o >/dev/null 2>&1 2024-09-18 15:24:29 INFO system.fedora40 stdout: /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DCDI_SIZE_TYPE=size_t -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -pthread -c -o calendar.lo calendar.c 2024-09-18 15:24:29 INFO system.fedora40 stdout: libtool: compile: gcc -DHAVE_CONFIG_H -I. -DCDI_SIZE_TYPE=size_t -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -pthread -c calendar.c -fPIC -DPIC -o .libs/calendar.o 2024-09-18 15:24:29 INFO system.fedora40 stdout: libtool: compile: gcc -DHAVE_CONFIG_H -I. -DCDI_SIZE_TYPE=size_t -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -pthread -c calendar.c -fPIC -DPIC -o calendar.o >/dev/null 2>&1 2024-09-18 15:24:29 INFO system.fedora40 stdout: /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DCDI_SIZE_TYPE=size_t -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -pthread -c -o cdf.lo cdf.c 2024-09-18 15:24:29 INFO system.fedora40 stdout: libtool: compile: gcc -DHAVE_CONFIG_H -I. -DCDI_SIZE_TYPE=size_t -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -pthread -c cdf.c -fPIC -DPIC -o .libs/cdf.o 2024-09-18 15:24:30 INFO system.fedora40 stdout: libtool: compile: gcc -DHAVE_CONFIG_H -I. -DCDI_SIZE_TYPE=size_t -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -pthread -c cdf.c -fPIC -DPIC -o cdf.o >/dev/null 2>&1 2024-09-18 15:24:30 INFO system.fedora40 stdout: /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DCDI_SIZE_TYPE=size_t -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -pthread -c -o cdf_int.lo cdf_int.c 2024-09-18 15:24:30 INFO system.fedora40 stdout: libtool: compile: gcc -DHAVE_CONFIG_H -I. -DCDI_SIZE_TYPE=size_t -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -pthread -c cdf_int.c -fPIC -DPIC -o .libs/cdf_int.o 2024-09-18 15:24:30 INFO system.fedora40 stderr: cdf_int.c: In function 'cdf_get_att_int64': 2024-09-18 15:24:30 INFO system.fedora40 stderr: cdf_int.c:725:55: error: passing argument 4 of 'nc_get_att_longlong' from incompatible pointer type [-Wincompatible-pointer-types] 2024-09-18 15:24:30 INFO system.fedora40 stderr: 725 | int status = nc_get_att_longlong(ncid, varid, name, ip); 2024-09-18 15:24:30 INFO system.fedora40 stderr: | ^~ 2024-09-18 15:24:30 INFO system.fedora40 stderr: | | 2024-09-18 15:24:30 INFO system.fedora40 stderr: | int64_t * {aka long int *} 2024-09-18 15:24:30 INFO system.fedora40 stderr: In file included from cdf_config.h:10, 2024-09-18 15:24:30 INFO system.fedora40 stderr: from cdi_int.h:18, 2024-09-18 15:24:30 INFO system.fedora40 stderr: from cdf_int.c:8: 2024-09-18 15:24:30 INFO system.fedora40 stderr: /usr/include/netcdf.h:1186:71: note: expected 'long long int *' but argument is of type 'int64_t *' {aka 'long int *'} 2024-09-18 15:24:30 INFO system.fedora40 stderr: 1186 | nc_get_att_longlong(int ncid, int varid, const char *name, long long *ip); 2024-09-18 15:24:30 INFO system.fedora40 stderr: | ~~~~~~~~~~~^~ 2024-09-18 15:24:30 INFO system.fedora40 stderr: make[3]: *** [Makefile:1025: cdf_int.lo] Error 1 2024-09-18 15:24:30 INFO system.fedora40 stdout: make[3]: Leaving directory '/root/rpmbuild/BUILD/cdo-2.2.0/libcdi/src' 2024-09-18 15:24:30 INFO system.fedora40 stderr: make[2]: *** [Makefile:768: all] Error 2 2024-09-18 15:24:30 INFO system.fedora40 stdout: make[2]: Leaving directory '/root/rpmbuild/BUILD/cdo-2.2.0/libcdi/src' 2024-09-18 15:24:30 INFO system.fedora40 stderr: make[1]: *** [Makefile:542: all-recursive] Error 1 2024-09-18 15:24:30 INFO system.fedora40 stdout: make[1]: Leaving directory '/root/rpmbuild/BUILD/cdo-2.2.0/libcdi' 2024-09-18 15:24:30 INFO system.fedora40 stderr: make: *** [Makefile:508: all-recursive] Error 1 2024-09-18 15:24:30 INFO system.fedora40 stderr: error: Bad exit status from /var/tmp/rpm-tmp.r0oMgB (%build) 2024-09-18 15:24:30 INFO system.fedora40 stderr: Bad exit status from /var/tmp/rpm-tmp.r0oMgB (%build) 2024-09-18 15:24:30 INFO system.fedora40 stdout: 2024-09-18 15:24:30 INFO system.fedora40 stdout: RPM build errors: { "source": { "source": "https://github.com/ARPA-SIMC/cdo-rpm", "host_path": "/tmp/tmpyv4l9cyy/cdo-rpm", "guest_path": "/srv/moncic-ci/source/cdo-rpm", "trace_log": [ "git -c advice.detachedHead=false clone --quiet https://github.com/ARPA-SIMC/cdo-rpm --branch master" ], "specfile_path": "cdo.spec" }, "distro": "fedora:40", "name": "cdo", "quick": false, "success": false, "artifacts": [], "trace_log": [], "artifacts_dir": null, "source_only": false, "on_success": [], "on_fail": [], "on_end": [], "specfile": "cdo.spec" } Traceback (most recent call last): File "/usr/bin/monci", line 48, in cli.run_main(main) File "/usr/lib/python3.11/site-packages/moncic/cli/base.py", line 68, in run_main sys.exit(func()) ^^^^^^ File "/usr/bin/monci", line 44, in main return handler.run() ^^^^^^^^^^^^^ File "/usr/lib/python3.11/site-packages/moncic/cli/build.py", line 105, in run builder.run_build() File "/usr/lib/python3.11/site-packages/moncic/utils/guest.py", line 20, in wrapper return f(*args, **kw) ^^^^^^^^^^^^^^ File "/usr/lib/python3.11/site-packages/moncic/build/builder.py", line 137, in run_build self.build = container.run_callable( ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3.11/site-packages/moncic/container.py", line 484, in run_callable return completed.result() ^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3.11/site-packages/moncic/runner.py", line 180, in result raise self.exc_info[1].with_traceback(self.exc_info[2]) File "/usr/lib/python3.11/site-packages/moncic/runner.py", line 508, in execute res = self.func(*self.args) File "/usr/lib/python3.11/site-packages/moncic/utils/guest.py", line 35, in wrapper return f(*args, **kw) ^^^^^^^^^^^^^^^^^ File "/usr/lib/python3.11/site-packages/moncic/build/builder.py", line 193, in build_in_container self.build.build() ^^^^^^^^^^^^^^^^^ File "/usr/lib/python3.11/site-packages/moncic/utils/guest.py", line 35, in wrapper return f(*args, **kw) ^^^^^^^^^^^^^^^^^ File "/usr/lib/python3.11/site-packages/moncic/build/arpa.py", line 106, in build self.trace_run(["rpmbuild", "-ba", self.specfile]) ^^^^^^^^^^^^^^^ File "/usr/lib/python3.11/site-packages/moncic/build/build.py", line 134, in trace_run run(cmd, check=check, **kw) ^^^^^^^^^^^^^^^^^ File "/usr/lib/python3.11/site-packages/moncic/utils/run.py", line 35, in run return subprocess.run(cmd, check=check, **kw) ^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/subprocess.py", line 571, in run raise CalledProcessError(retcode, process.args, ^^^^^^^^^^^^^^^ subprocess.CalledProcessError: Command '['rpmbuild', '-ba', 'cdo.spec']' returned non-zero exit status 1.